Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 3.8e-179 631.3 310 100.0
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 3.5e-156 555.1 310 85.2
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.0e-143 512.7 310 77.7
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.9e-142 508.8 310 77.1
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 3.8e-142 508.4 310 77.1
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 5.4e-141 504.6 310 76.5
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 7.1e-141 504.2 307 79.2
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 9.2e-141 503.8 310 77.7
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 2.7e-140 502.3 306 78.1
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 4.6e-140 501.5 308 79.5
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.1e-138 496.9 310 75.8
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 2.5e-138 495.7 310 75.5
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 2.5e-138 495.7 316 75.0
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 4.3e-138 495.0 310 75.8
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 9.6e-138 493.8 311 74.0
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.2e-137 493.4 309 74.8
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 2.1e-137 492.7 310 75.2
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.7e-137 491.5 310 74.8
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.8e-136 489.6 310 74.5
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 3.1e-136 488.8 310 74.5
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 3.1e-136 488.8 310 72.9
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 8.9e-136 487.3 310 74.8
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 2.0e-135 486.1 310 74.2
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 2.0e-135 486.1 310 75.2
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 3.4e-135 485.3 304 76.0
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 4.4e-135 485.0 309 74.4
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 5.8e-135 484.6 325 71.7
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 5.8e-135 484.6 310 74.5
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 9.9e-135 483.8 307 75.6
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 9.9e-135 483.8 304 75.3
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.3e-134 483.4 311 72.3
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.9e-134 482.3 311 73.0
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.4e-134 481.1 311 74.0
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 6.4e-134 481.1 308 75.3
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.1e-133 480.3 311 74.0
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.9e-133 479.6 307 73.0
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.9e-133 479.6 307 73.3
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 7.1e-133 477.6 302 73.5
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.2e-132 476.9 306 73.9
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 1.2e-132 476.9 310 72.9
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.2e-132 476.9 308 73.7
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.6e-132 476.5 307 73.6
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 2.7e-132 475.7 307 74.3
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.7e-132 475.7 309 72.5
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 2.7e-132 475.7 307 72.6
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.6e-132 474.9 316 72.8
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.0e-131 473.8 316 72.8
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.3e-131 473.4 307 72.3
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 5.1e-131 471.5 282 79.8
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.1e-130 470.3 307 73.3
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 4.3e-130 468.4 341 67.2
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 9.6e-130 467.2 310 71.0
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.3e-129 466.8 312 71.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 2.8e-129 465.7 310 70.3
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 3.6e-129 465.3 307 72.0
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 4.8e-129 464.9 307 72.6
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.4e-128 462.6 309 72.2
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 3.1e-128 462.2 341 66.6
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 4.0e-128 461.8 281 76.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 9.0e-128 460.7 308 70.8
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.2e-127 460.3 307 71.3
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.2e-127 460.3 309 71.8
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 1.5e-127 459.9 308 70.5
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.6e-127 459.1 307 71.7
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 4.5e-127 458.4 309 70.6
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 7.6e-127 457.6 345 66.4
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 9.9e-127 457.2 303 71.9
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.7e-126 456.4 310 70.3
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.9e-126 455.7 307 69.1
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 2.9e-126 455.7 299 70.9
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.9e-126 455.7 336 67.0
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 6.4e-126 454.5 301 71.4
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.4e-125 453.4 316 69.9
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 4.2e-125 451.8 309 69.9
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 5.4e-125 451.4 311 71.1
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 7.1e-125 451.1 306 70.3
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 9.3e-125 450.7 315 70.2
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 2.7e-124 449.1 307 71.0
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 2.3e-123 446.0 310 69.4
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 4.8e-121 438.3 306 69.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.5e-119 433.3 297 68.7
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 9.9e-119 430.6 356 61.2
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 1.3e-118 430.3 303 66.0
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.7e-118 429.9 332 65.1
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.9e-117 426.4 304 66.8
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 5.5e-117 424.9 283 72.8
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.0e-115 420.6 283 72.1
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 8.7e-115 417.5 351 60.1
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 2.4e-112 409.5 284 69.7
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 3.1e-112 409.1 317 64.0
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.3e-112 408.3 286 70.3
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 6.9e-112 407.9 370 55.9
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 3.1e-104 382.5 303 63.0
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 6.5e-102 374.8 309 60.8
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 7.9e-100 367.9 315 60.6
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 7.9e-100 367.9 310 59.4
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 7.4e-98 361.3 305 57.7
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 4.8e-97 358.6 299 59.5
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 6.9e-96 354.8 322 56.8
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 8.5e-94 347.8 283 62.9
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 8.5e-94 347.8 303 56.4
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.1e-93 347.4 223 72.2
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.3e-90 335.9 224 70.1
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 4.4e-90 335.5 276 60.5
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 9.1e-88 327.8 224 70.1
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.2e-85 319.3 304 53.6
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 3.8e-78 295.8 202 69.3
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.0e-74 283.5 308 47.4
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 4.8e-73 278.9 200 64.5
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 7.0e-72 275.0 236 61.9
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 1.6e-71 273.9 199 64.3
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 7.7e-71 271.6 192 68.8
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 3.8e-70 269.2 198 66.2
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.2e-69 266.2 167 75.4
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 8.8e-67 258.1 213 58.7
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 3.1e-56 223.0 138 79.7
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 4.5e-55 219.2 310 40.6
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 5.9e-55 218.8 206 55.8
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.6e-52 209.5 170 61.8
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 1.4e-51 207.6 154 61.7
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 2.3e-51 206.8 389 34.7
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.8e-43 180.6 131 67.2
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.3e-38 164.5 109 71.6
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 3.0e-38 163.3 297 36.0
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 5.8e-34 149.1 294 34.4
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.2e-32 143.3 279 33.0
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 6.0e-31 139.0 113 58.4
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 6.8e-27 125.6 83 69.9
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 4.1e-24 116.3 136 45.6
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 7.3e-21 105.5 63 74.6
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 5.8e-18 95.9 85 58.8
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 8.7e-14 82.0 154 36.4
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.5e-13 81.3 57 68.4
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 4.3e-13 79.7 74 54.1
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.8e-12 76.3 80 55.0
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 7.1e-08 62.4 50 54.0
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 3.5e-07 60.1 36 77.8


User provided reference genes

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