Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 3.0e-226 788.1 380 100.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 3.7e-216 754.6 380 95.8
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.8e-199 699.1 380 88.2
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.3e-186 655.6 412 78.9
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.0e-174 615.9 380 78.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.3e-172 608.2 382 75.4
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.1e-170 603.6 382 75.4
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 8.9e-170 600.5 381 75.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.6e-169 599.0 381 75.6
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.9e-168 595.5 381 75.1
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.9e-168 595.5 381 75.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.4e-167 593.2 378 74.6
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.3e-160 570.1 379 70.2
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.7e-160 569.7 381 70.9
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 8.3e-160 567.4 377 72.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.6e-158 561.6 381 69.8
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 4.3e-156 555.1 380 68.4
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.1e-154 550.4 379 66.8
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.8e-154 549.7 371 70.6
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.3e-152 543.5 376 67.0
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.7e-152 543.1 381 67.5
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-151 540.4 378 66.7
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-151 540.4 378 66.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 7.1e-151 537.7 378 66.7
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 6.0e-150 534.6 380 66.6
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 6.0e-150 534.6 379 66.2
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 7.8e-150 534.3 379 65.4
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 1.3e-149 533.5 379 66.0
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.7e-149 533.1 357 70.6
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.3e-149 532.7 377 66.6
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.9e-149 531.9 378 66.7
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.5e-148 530.0 375 67.5
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.5e-148 530.0 379 64.9
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 3.3e-148 528.9 427 61.1
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.3e-148 528.9 381 66.1
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 2.1e-147 526.2 375 66.9
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 4.7e-147 525.0 381 65.4
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 4.7e-147 525.0 378 66.1
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 2.4e-146 522.7 397 62.7
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.0e-145 519.6 377 67.1
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.4e-145 518.8 378 65.9
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.3e-144 516.9 381 62.7
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 3.8e-144 515.4 378 65.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 4.9e-144 515.0 379 64.1
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.2e-143 512.3 375 65.6
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 5.4e-143 511.5 381 63.0
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 9.3e-143 510.8 375 63.5
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 9.3e-143 510.8 380 65.8
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.6e-142 510.0 381 63.0
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.6e-142 510.0 375 65.6
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 3.5e-142 508.8 379 61.7
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 7.8e-142 507.7 376 64.4
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.0e-141 507.3 381 62.2
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.0e-141 507.3 377 65.8
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.0e-141 505.8 378 65.1
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 3.9e-141 505.4 381 64.8
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 5.1e-141 505.0 382 61.8
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.5e-140 503.4 362 67.7
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.5e-140 502.7 362 68.0
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.5e-140 502.7 384 62.0
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.3e-139 500.4 383 61.6
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.3e-139 500.4 374 64.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.6e-139 500.0 378 62.7
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 2.1e-139 499.6 381 62.2
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.1e-139 499.6 383 66.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 4.0e-138 495.4 374 63.1
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 5.3e-138 495.0 382 62.0
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 5.3e-138 495.0 382 62.0
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.5e-137 493.4 353 66.6
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 2.6e-137 492.7 388 60.3
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 4.9e-136 488.4 380 62.9
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.9e-136 488.4 374 61.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 2.1e-134 483.0 352 63.6
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.1e-134 483.0 372 61.6
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 4.6e-134 481.9 374 60.4
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.8e-133 479.9 357 62.7
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.5e-132 476.9 374 60.4
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.7e-131 472.2 375 61.3
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.4e-129 465.7 376 60.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.5e-129 465.3 376 60.6
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.3e-128 463.8 379 59.4
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-127 460.7 374 61.0
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 9.6e-124 447.6 304 70.1
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 2.8e-123 446.0 289 74.7
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.8e-121 438.3 375 57.3
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.0e-120 437.6 322 65.5
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 8.4e-120 434.5 378 55.6
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.1e-118 429.9 400 55.2
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 3.5e-118 429.1 379 56.2
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 4.6e-118 428.7 304 67.8
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 7.9e-118 427.9 377 55.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 3.7e-115 419.1 329 60.8
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 9.0e-114 414.5 368 54.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 9.0e-114 414.5 380 53.9
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 9.0e-114 414.5 372 52.7
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 3.8e-112 409.1 375 52.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 4.2e-111 405.6 280 69.3
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.2e-110 404.1 360 56.1
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.3e-108 396.0 378 53.4
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.1e-106 391.0 376 52.4
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.9e-103 380.2 344 56.7
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.2e-103 379.4 259 70.3
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 9.4e-103 377.9 397 51.6
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.6e-102 377.1 281 65.5
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.7e-102 375.6 378 53.7
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 8.2e-99 364.8 255 68.2
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.0e-92 343.6 286 58.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 5.9e-89 332.0 225 68.9
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.3e-85 320.1 366 45.4
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.0e-85 319.7 380 43.7
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 5.7e-84 315.5 218 67.4
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.7e-83 312.8 377 45.9
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.6e-78 297.4 377 41.4
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.3e-69 266.9 183 65.6
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 3.3e-63 246.5 195 63.6
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.0e-61 241.5 393 33.6
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.1e-50 204.9 170 58.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 2.9e-43 180.3 150 58.0
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 3.0e-32 143.7 110 62.7
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.1e-30 137.5 200 42.0
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 2.9e-27 127.1 113 52.2
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.2e-25 121.7 86 66.3
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 8.1e-14 82.4 87 50.6
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.0e-12 77.8 46 69.6
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 3.4e-12 77.0 137 32.1


User provided reference genes

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