Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 8.9e-60 233.4 118 100.0
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 7.8e-56 220.3 118 93.2
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 6.6e-39 164.1 126 69.0
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 9.5e-38 160.2 131 71.0
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.6e-35 152.1 130 64.6
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 9.9e-35 150.2 129 65.1
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.9e-34 147.9 129 65.9
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 4.9e-34 147.9 130 65.4
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.4e-33 146.4 122 68.0
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.1e-33 144.8 129 65.1
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.5e-32 141.7 129 64.3
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 3.5e-32 141.7 129 63.6
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 3.3e-30 135.2 108 69.4
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.6e-30 134.4 114 66.7
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.6e-30 134.4 114 66.7
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.2e-29 133.3 114 65.8
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.2e-29 133.3 123 62.6
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 2.1e-29 132.5 117 64.1
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 4.7e-29 131.3 86 79.1
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 4.7e-29 131.3 117 64.1
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 6.2e-29 131.0 83 79.5
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.8e-28 129.4 123 62.6
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 6.9e-28 127.5 136 55.1
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 8.9e-28 127.1 119 63.0
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.5e-27 126.3 88 76.1
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 2.6e-27 125.6 127 57.5
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.6e-27 125.6 132 57.6
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.4e-27 125.2 88 76.1
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 5.8e-27 124.4 132 56.8
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.7e-26 122.9 98 68.4
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.9e-26 122.1 88 75.0
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 4.9e-26 121.3 91 70.3
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 6.4e-26 120.9 85 74.1
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 6.4e-26 120.9 113 58.4
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.1e-25 120.2 126 58.7
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.1e-25 120.2 126 59.5
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 4.2e-25 118.2 139 52.5
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.6e-24 116.3 111 60.4
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 3.5e-24 115.2 136 53.7
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 1.0e-23 113.6 87 70.1
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.0e-23 113.6 113 58.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 8.7e-23 110.5 89 61.8
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.1e-22 110.2 116 57.8
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.1e-22 110.2 106 61.3
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.5e-22 109.8 128 57.8
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-22 109.4 116 50.0
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-22 109.4 116 50.0
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.3e-22 108.6 84 69.0
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.3e-22 108.6 84 69.0
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 3.3e-22 108.6 88 69.3
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 5.6e-22 107.8 90 61.1
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.6e-21 106.3 129 50.4
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 3.6e-21 105.1 93 58.1
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 1.4e-20 103.2 133 48.1
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.4e-20 103.2 97 63.9
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 4.0e-20 101.7 94 58.5
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 6.9e-20 100.9 90 65.6
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.2e-19 100.1 80 65.0
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 7.6e-19 97.4 86 58.1
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 1.3e-18 96.7 91 63.7
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 2.2e-18 95.9 91 61.5
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 3.8e-18 95.1 76 67.1
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 3.8e-18 95.1 115 50.4
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 2.4e-17 92.4 133 45.9
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.4e-17 92.4 106 50.0
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 4.6e-16 88.2 91 52.7
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 6.0e-16 87.8 66 68.2
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 6.0e-16 87.8 115 45.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 7.9e-16 87.4 73 63.0
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.8e-15 86.3 83 59.0
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 5.1e-15 84.7 85 56.5
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.1e-14 83.6 75 58.7
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-14 83.6 80 56.2
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-14 83.6 88 52.3
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-14 83.6 68 67.6
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 1.1e-14 83.6 88 52.3
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 1.1e-14 83.6 88 52.3
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 1.1e-14 83.6 88 52.3
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 1.1e-14 83.6 88 52.3
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 1.1e-14 83.6 73 64.4
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.1e-14 83.6 76 60.5
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.9e-14 82.8 89 52.8
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.3e-14 81.6 66 62.1
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.3e-14 81.6 68 67.6
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 5.6e-14 81.3 68 66.2
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 5.6e-14 81.3 68 66.2
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.6e-14 81.3 76 57.9
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 5.6e-14 81.3 100 52.0
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 7.4e-14 80.9 68 66.2
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 7.4e-14 80.9 68 66.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.8e-13 78.2 75 57.3
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 6.2e-13 77.8 107 44.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.4e-12 76.6 72 63.9
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.8e-12 76.3 69 65.2
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 5.3e-12 74.7 72 61.1
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 5.3e-12 74.7 71 53.5
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.3e-12 74.7 84 51.2
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.0e-11 72.8 70 62.9
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.4e-11 72.0 71 60.6
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 7.6e-11 70.9 69 60.9
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 9.9e-11 70.5 79 51.9
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.7e-10 69.7 69 60.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.7e-10 69.7 69 60.9
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 7.1e-09 64.3 107 43.9
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 2.5e-06 55.8 83 44.6


User provided reference genes

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