Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.9e-74 281.6 161 100.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.6e-64 248.4 161 88.8
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.2e-64 247.7 161 90.1
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.8e-55 219.5 160 78.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 9.0e-55 217.2 166 77.1
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 2.6e-54 215.7 161 77.0
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 5.8e-54 214.5 161 78.3
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 7.6e-54 214.2 161 80.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 9.9e-54 213.8 161 77.0
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.3e-53 213.4 161 79.5
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 6.4e-53 211.1 161 77.6
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 8.4e-53 210.7 162 79.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.4e-52 209.9 165 75.2
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.4e-52 209.9 162 78.4
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.9e-52 209.5 161 77.0
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.4e-52 209.1 161 78.9
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 2.4e-52 209.1 161 77.6
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 3.2e-52 208.8 159 83.6
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 7.1e-52 207.6 161 77.0
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 7.1e-52 207.6 154 81.2
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 2.7e-51 205.7 161 77.0
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.7e-51 205.7 158 78.5
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.0e-50 203.8 172 72.7
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.0e-50 203.8 161 76.4
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.0e-50 202.2 161 76.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 3.0e-50 202.2 161 75.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.9e-50 201.8 154 77.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.3e-49 198.7 154 78.6
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 5.6e-49 198.0 156 77.6
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 3.7e-48 195.3 161 76.4
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 4.8e-48 194.9 163 74.8
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.8e-48 194.9 200 63.5
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 4.8e-48 194.9 156 75.6
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 4.8e-48 194.9 161 73.3
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.1e-47 193.7 163 72.4
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.1e-47 193.7 161 74.5
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 5.3e-47 191.4 161 75.8
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 6.9e-47 191.0 156 75.0
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 6.9e-47 191.0 162 72.8
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 2.0e-46 189.5 156 73.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 4.5e-46 188.3 161 70.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 5.8e-46 188.0 163 74.2
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 7.6e-46 187.6 161 72.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 9.9e-46 187.2 162 72.8
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 9.9e-46 187.2 161 77.0
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 9.9e-46 187.2 156 74.4
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.9e-45 185.7 161 70.2
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 3.8e-45 185.3 153 74.5
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 8.4e-45 184.1 170 68.8
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 3.2e-44 182.2 161 72.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 7.1e-44 181.0 158 70.3
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 9.3e-44 180.6 162 72.8
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.7e-43 179.1 201 59.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 4.6e-43 178.3 154 75.3
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.3e-42 176.8 152 73.7
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.9e-42 175.3 163 69.9
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 5.1e-42 174.9 159 69.8
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.5e-41 173.3 158 69.6
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.5e-41 173.3 162 69.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.5e-41 173.3 155 72.3
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.9e-41 172.9 162 71.0
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.5e-41 172.6 163 69.9
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 4.3e-41 171.8 139 75.5
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 7.4e-41 171.0 155 72.3
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 7.4e-41 171.0 126 79.4
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.3e-40 170.2 162 68.5
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 3.7e-40 168.7 162 67.9
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 4.8e-40 168.3 163 70.6
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 8.2e-40 167.5 194 48.5
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 4.0e-39 165.2 163 67.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 6.9e-39 164.5 163 68.7
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 9.0e-39 164.1 155 69.0
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.5e-38 163.3 150 68.0
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 7.6e-38 161.0 155 68.4
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 7.6e-38 161.0 162 66.7
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-37 160.6 156 67.9
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-37 160.2 157 67.5
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.3e-37 160.2 173 53.8
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.3e-37 160.2 167 62.9
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.7e-37 159.8 118 79.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.2e-37 159.5 156 67.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 4.9e-37 158.3 151 70.2
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.4e-36 156.8 161 65.8
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 2.5e-36 156.0 155 67.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 9.3e-36 154.1 154 67.5
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 4.6e-35 151.8 187 47.6
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-34 150.2 155 65.2
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-34 150.2 150 66.7
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.8e-34 149.8 150 66.0
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.3e-34 149.4 150 66.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.5e-33 146.7 124 68.5
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.3e-32 143.7 124 67.7
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.8e-32 142.5 155 51.6
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.7e-32 142.1 115 71.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.4e-31 139.4 124 62.1
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 4.1e-31 138.7 119 72.3
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 2.6e-30 136.0 103 67.0
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.0e-29 134.0 115 70.4
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.0e-26 124.0 107 58.9
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 3.7e-24 115.5 146 48.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 4.8e-24 115.2 123 63.4
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.7e-19 98.6 101 56.4
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 4.4e-17 92.0 152 42.1
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 8.2e-16 87.8 98 52.0
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 6.9e-15 84.7 100 55.0
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 4.5e-14 82.0 67 68.7
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.0e-10 69.3 59 61.0
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 8.8e-10 67.8 60 53.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 4.4e-09 65.5 96 39.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 3.1e-07 59.3 65 53.8


User provided reference genes

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