Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 1.7e-58 229.2 121 100.0
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.5e-57 226.1 121 98.3
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.2e-45 185.7 116 83.6
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 3.1e-44 181.8 116 79.3
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.2e-43 179.9 116 80.2
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.5e-43 177.9 116 78.4
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 7.7e-43 177.2 116 76.7
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.3e-42 176.4 116 77.6
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.9e-42 175.3 117 78.6
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.9e-42 175.3 120 75.8
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 5.0e-42 174.5 116 75.0
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 8.5e-42 173.7 116 76.7
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.5e-41 172.9 114 78.9
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.5e-41 172.9 116 77.6
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.9e-41 172.6 116 78.4
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 5.5e-41 171.0 113 77.0
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 5.5e-41 171.0 105 81.9
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 9.5e-41 170.2 116 76.7
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.2e-40 169.9 106 78.3
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.2e-40 169.9 116 71.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.2e-40 169.9 109 79.8
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.2e-40 169.9 114 78.1
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-40 169.9 109 77.1
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.6e-40 169.5 109 78.9
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.6e-40 169.5 112 78.6
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.6e-40 169.5 116 73.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.6e-40 169.5 105 81.0
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.6e-40 169.5 105 81.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.1e-40 169.1 109 77.1
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 2.8e-40 168.7 112 78.6
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.8e-40 168.7 116 73.3
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 2.8e-40 168.7 116 73.3
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.8e-40 168.7 105 79.0
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.6e-40 168.3 112 77.7
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 76.8
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 6.1e-40 167.5 112 76.8
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 8.0e-40 167.2 109 77.1
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 8.0e-40 167.2 116 75.9
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.0e-39 166.8 116 73.3
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 1.0e-39 166.8 112 77.7
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.4e-39 166.4 112 77.7
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.3e-39 165.6 112 74.1
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.3e-39 165.6 116 72.4
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 2.3e-39 165.6 113 76.1
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 5.2e-39 164.5 110 78.2
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 5.2e-39 164.5 105 80.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 8.8e-39 163.7 109 74.3
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 8.8e-39 163.7 109 74.3
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 8.8e-39 163.7 116 71.6
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.5e-38 162.9 109 77.1
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.0e-38 162.5 109 76.1
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.6e-38 162.2 109 75.2
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.6e-38 162.2 116 70.7
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 3.4e-38 161.8 112 75.0
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 4.4e-38 161.4 109 75.2
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 5.7e-38 161.0 109 75.2
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 5.7e-38 161.0 111 75.7
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 5.7e-38 161.0 112 73.2
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 5.7e-38 161.0 114 71.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 7.5e-38 160.6 112 73.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.3e-37 159.8 116 74.1
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 2.8e-37 158.7 112 72.3
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 2.8e-37 158.7 112 73.2
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 3.7e-37 158.3 109 73.4
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.7e-37 158.3 116 69.0
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 4.9e-37 157.9 114 71.1
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 6.3e-37 157.5 112 73.2
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 6.3e-37 157.5 110 70.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 6.3e-37 157.5 115 68.7
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 6.3e-37 157.5 112 70.5
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.4e-36 156.4 109 74.3
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 3.1e-36 155.2 117 69.2
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 4.1e-36 154.8 104 76.9
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 2.7e-35 152.1 108 68.5
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 3.5e-35 151.8 112 68.8
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 5.9e-35 151.0 110 71.8
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.0e-34 150.2 116 66.4
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 5.0e-34 147.9 97 78.4
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.1e-33 146.7 116 64.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.8e-32 142.1 133 60.9
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.8e-31 139.4 172 50.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 4.0e-31 138.3 90 74.4
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 6.8e-31 137.5 104 71.2
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.2e-30 136.7 105 68.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 2.0e-30 136.0 87 77.0
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 3.4e-30 135.2 87 77.0
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.4e-30 135.2 87 78.2
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 7.5e-30 134.0 93 73.1
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.3e-29 133.3 82 80.5
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.7e-29 132.9 89 73.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.2e-29 132.5 87 75.9
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.2e-29 132.5 82 79.3
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.7e-29 131.7 97 75.3
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 3.7e-29 131.7 85 80.0
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.9e-29 131.3 82 79.3
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 4.9e-29 131.3 90 75.6
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.4e-28 129.8 87 75.9
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 2.0e-27 125.9 79 78.5
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.7e-27 125.6 86 75.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.7e-26 122.9 113 62.8
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.5e-25 117.1 78 76.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 7.5e-22 107.5 82 69.5
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.7e-19 99.0 78 66.7
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 5.0e-18 94.7 63 77.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 6.6e-18 94.4 106 51.9
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 5.6e-17 91.3 69 68.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.2e-16 90.1 76 65.8
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.2e-16 90.1 120 50.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 4.7e-16 88.2 50 86.0
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 5.2e-15 84.7 57 75.4
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 4.9e-13 78.2 98 45.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.4e-13 77.8 60 71.7
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.6e-11 73.2 114 43.0


User provided reference genes

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