Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 2.9e-74 282.3 204 100.0
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.2e-32 144.1 221 67.4
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.4e-28 130.6 211 59.7
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 2.0e-27 126.7 62 87.1
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 5.9e-27 125.2 202 60.4
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 1.0e-26 124.4 203 59.6
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 2.9e-26 122.9 202 59.4
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 2.5e-25 119.8 61 78.7
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.0e-23 114.4 62 77.4
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.0e-23 114.4 203 57.1
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 6.7e-23 111.7 62 74.2
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 2.6e-22 109.8 62 74.2
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 4.4e-22 109.0 56 76.8
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 4.4e-22 109.0 64 71.9
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 9.7e-22 107.8 59 72.9
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 1.3e-21 107.5 63 66.7
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 2.2e-21 106.7 55 74.5
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 2.8e-21 106.3 61 70.5
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 2.8e-21 106.3 48 87.5
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 3.7e-21 105.9 55 78.2
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 1.1e-20 104.4 60 66.7
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 1.4e-20 104.0 53 77.4
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 4.1e-20 102.4 63 66.7
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 5.3e-20 102.1 196 53.6
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 7.0e-20 101.7 61 60.7
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 9.1e-20 101.3 62 66.1
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 9.1e-20 101.3 62 67.7
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.2e-19 100.9 60 63.3
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.6e-19 100.5 63 68.3
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 5.9e-19 98.6 49 79.6
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 1.0e-18 97.8 195 40.5
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 1.3e-18 97.4 46 82.6
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 2.2e-18 96.7 198 64.1
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 2.9e-18 96.3 64 64.1
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 6.5e-18 95.1 61 65.6
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 1.5e-17 94.0 44 81.8
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 1.9e-17 93.6 49 73.5
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 4.2e-17 92.4 61 59.0
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 1.2e-16 90.9 60 60.0
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 8.0e-16 88.2 53 64.2
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 1.4e-15 87.4 45 71.1
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 3.0e-15 86.3 58 62.1
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 5.7e-14 82.0 40 80.0
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 9.7e-14 81.3 45 68.9
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.4e-12 77.4 55 56.4
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.4e-12 77.4 40 77.5
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 1.8e-12 77.0 61 49.2
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 7.0e-12 75.1 40 67.5
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 7.0e-12 75.1 40 67.5
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 7.0e-12 75.1 40 67.5
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 7.0e-12 75.1 40 67.5
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 1.6e-11 73.9 40 65.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 1.6e-11 73.9 40 67.5
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 1.6e-11 73.9 40 67.5
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 1.6e-11 73.9 40 67.5
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 2.0e-11 73.6 40 67.5
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 2.7e-11 73.2 40 65.0
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 4.5e-11 72.4 40 65.0
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 4.5e-11 72.4 40 65.0
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 4.5e-11 72.4 40 65.0
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 4.5e-11 72.4 40 65.0
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 4.5e-11 72.4 40 65.0
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 5.9e-11 72.0 40 65.0
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 1.3e-10 70.9 40 62.5
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 2.2e-10 70.1 40 62.5
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 2.2e-10 70.1 40 62.5
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 5.0e-10 68.9 51 52.9
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 1.5e-09 67.4 45 62.2
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 2.7e-08 63.2 61 42.6
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 1.0e-07 61.2 57 45.6
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 2.0e-06 57.0 40 67.5


User provided reference genes

Program Settings