Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G233101 Populus trichocarpa HOM05D001685 ORTHO05D009095 2.1e-64 248.8 123 100.0
Sabra05G0179800 Salix brachista HOM05D001685 ORTHO05D009095 4.7e-56 221.1 126 88.9
Potri.002G029600 Populus trichocarpa HOM05D001685 ORTHO05D009095 1.1e-52 209.9 128 85.9
CiPaw.07G155500 Carya illinoinensis HOM05D001685 ORTHO05D009095 4.5e-46 188.0 127 76.4
CsaV3_3G045540 Cucumis sativus L. HOM05D001685 ORTHO05D009095 2.2e-45 185.7 129 74.4
CSS0037156 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 3.8e-45 184.9 128 77.3
Eucgr.F01606 Eucalyptus grandis HOM05D001685 ORTHO05D009095 4.9e-45 184.5 126 72.2
Haze_22569 Corylus avellana HOM05D001685 ORTHO05D009095 8.4e-45 183.7 127 73.2
MELO3C003786.2 Cucumis melo HOM05D001685 ORTHO05D009095 8.4e-45 183.7 129 73.6
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 1.1e-44 183.3 129 74.4
Cfa013891 Carpinus fangiana HOM05D001685 ORTHO05D009095 1.4e-44 183.0 127 74.0
CSS0008119 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 1.9e-44 182.6 128 76.6
Manes.18G019200 Manihot esculenta HOM05D001685 ORTHO05D009095 1.9e-44 182.6 126 73.8
GSVIVG01009800001 Vitis vinifera HOM05D001685 ORTHO05D009095 1.2e-43 179.9 128 75.8
Thecc.08G035400 Theobroma cacao HOM05D001685 ORTHO05D009095 1.6e-43 179.5 129 71.3
PGR083G2764 Punica granatum HOM05D001685 ORTHO05D009095 2.1e-43 179.1 127 73.2
Gohir.D05G259700 Gossypium hirsutum HOM05D001685 ORTHO05D009095 4.6e-43 177.9 129 73.6
Gorai.009G271500 Gossypium raimondii HOM05D001685 ORTHO05D009095 4.6e-43 177.9 129 73.6
TAR381G0057 Trochodendron aralioides HOM05D001685 ORTHO05D009095 4.6e-43 177.9 128 74.2
COL.COLO4_26223 Corchorus olitorius HOM05D001685 ORTHO05D009095 6.0e-43 177.6 130 71.5
Lj4C32T13 Lonicera japonica HOM05D001685 ORTHO05D009095 6.0e-43 177.6 128 73.4
QL02p010383 Quercus lobata HOM05D001685 ORTHO05D009095 6.0e-43 177.6 127 74.8
QL02p010421 Quercus lobata HOM05D001685 ORTHO05D009095 6.0e-43 177.6 127 74.8
Prupe.1G372200 Prunus persica HOM05D001685 ORTHO05D009095 7.9e-43 177.2 127 73.2
Sc26g0003360 Simmondsia chinensis HOM05D001685 ORTHO05D009095 1.0e-42 176.8 126 73.0
Gohir.A05G258300 Gossypium hirsutum HOM05D001685 ORTHO05D009095 1.8e-42 176.0 129 72.9
SGA_v2.0_scaffold201G41336 Striga asiatica HOM05D001685 ORTHO05D009095 1.8e-42 176.0 128 71.1
Nn5g29153 Nelumbo nucifera HOM05D001685 ORTHO05D009095 2.3e-42 175.6 127 72.4
Duzib041G0390 Durio zibethinus HOM05D001685 ORTHO05D009095 5.1e-42 174.5 129 72.9
Dinv31798 Davidia involucrata HOM05D001685 ORTHO05D009095 1.9e-41 172.6 128 72.7
CANSAT25G3574 Cannabis sativa HOM05D001685 ORTHO05D009095 4.3e-41 171.4 128 72.7
MD15G1020600 Malus domestica HOM05D001685 ORTHO05D009095 4.3e-41 171.4 129 72.1
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 7.4e-41 170.6 124 74.2
SalBow7G2633 Salvia bowleyana HOM05D001685 ORTHO05D009095 9.6e-41 170.2 128 68.8
Rhsim07G0243900 Rhododendron simsii HOM05D001685 ORTHO05D009095 1.3e-40 169.9 128 70.3
HanXRQChr05g0149471 Helianthus annuus HOM05D001685 ORTHO05D009095 3.7e-40 168.3 118 74.6
Hma1.2p1_1394F.1_g280400 Hydrangea macrophylla HOM05D001685 ORTHO05D009095 4.8e-40 167.9 128 68.8
arahy.Tifrunner.gnm1.ann1.0FMT0L Arachis hypogaea HOM05D001685 ORTHO05D009095 6.2e-40 167.5 128 69.5
arahy.Tifrunner.gnm1.ann1.1F2VQA Arachis hypogaea HOM05D001685 ORTHO05D009095 6.2e-40 167.5 128 69.5
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 6.2e-40 167.5 129 67.4
TWI56G0203 Tripterygium wilfordii HOM05D001685 ORTHO05D009095 6.2e-40 167.5 127 67.7
THA.LOC104820512 Tarenaya hassleriana HOM05D001685 ORTHO05D009095 8.1e-40 167.2 128 66.4
PSO675G8938 Papaver somniferum HOM05D001685 ORTHO05D009095 1.4e-39 166.4 127 69.3
Nitab4.5_0002156g0130 Nicotiana tabacum HOM05D001685 ORTHO05D009095 1.8e-39 166.0 129 69.8
PSO541G2326 Papaver somniferum HOM05D001685 ORTHO05D009095 1.8e-39 166.0 127 69.3
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 2.4e-39 165.6 109 75.2
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 2.4e-39 165.6 128 69.5
vmacro04314 Vaccinium macrocarpon HOM05D001685 ORTHO05D009095 4.0e-39 164.9 128 68.8
Nitab4.5_0001840g0040 Nicotiana tabacum HOM05D001685 ORTHO05D009095 9.0e-39 163.7 129 69.0
Medtr1g023160 Medicago truncatula HOM05D001685 ORTHO05D009095 1.2e-38 163.3 129 65.9
Aqoxy6G01232 Aquilegia oxysepala HOM05D001685 ORTHO05D009095 1.5e-38 162.9 118 71.2
Hund17205 Selenicereus undatus HOM05D001685 ORTHO05D009095 1.5e-38 162.9 128 68.0
CDE09G0148 Ceratophyllum demersum HOM05D005369 ORTHO05D009095 2.0e-38 162.5 128 65.6
Lsat_1_v5_gn_5_25621 Lactuca sativa HOM05D001685 ORTHO05D009095 2.6e-38 162.2 128 69.5
Cc10_g02280 Coffea canephora HOM05D001685 ORTHO05D009095 3.4e-38 161.8 128 68.8
Lj5g0015544 Lotus japonicus HOM05D001685 ORTHO05D009095 4.5e-38 161.4 121 66.1
SEGI_28040 Sequoiadendron giganteum HOM05D001685 ORTHO05D009095 7.6e-38 160.6 128 66.4
VMungo0647G1310 Vigna mungo HOM05D001685 ORTHO05D009095 7.6e-38 160.6 123 68.3
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 9.9e-38 160.2 128 64.8
Sopen04g034510 Solanum pennellii HOM05D001685 ORTHO05D009095 9.9e-38 160.2 128 64.8
DCAR_017512 Daucus carota HOM05D001685 ORTHO05D009095 1.3e-37 159.8 111 70.3
Phvul.001G010500 Phaseolus vulgaris HOM05D001685 ORTHO05D009095 1.3e-37 159.8 123 68.3
ATR0665G478 Amborella trichopoda HOM05D001685 ORTHO05D009095 1.7e-37 159.5 132 63.6
Ca_13386_v3 Cicer arietinum L. HOM05D001685 ORTHO05D009095 1.7e-37 159.5 106 73.6
Ciclev10000620m.g Citrus clementina HOM05D001685 ORTHO05D009095 2.9e-37 158.7 128 66.4
ECA246G1724 Erigeron canadensis HOM05D001685 ORTHO05D009095 2.9e-37 158.7 128 68.0
Glyma.14G070100 Glycine max HOM05D001685 ORTHO05D009095 2.9e-37 158.7 107 72.9
RcHm_v2.0_Chr6g0301971 Rosa chinensis HOM05D001685 ORTHO05D009095 2.9e-37 158.7 128 68.8
PGSC0003DMG402003705 Solanum tuberosum HOM05D001685 ORTHO05D009095 4.9e-37 157.9 128 64.1
Ah.11g039830 Amaranthus hybridus HOM05D001685 ORTHO05D009095 8.4e-37 157.1 127 64.6
AUR62014453 Chenopodium quinoa HOM05D001685 ORTHO05D009095 1.9e-36 156.0 128 66.4
AUR62034545 Chenopodium quinoa HOM05D001685 ORTHO05D009095 2.4e-36 155.6 128 66.4
EL10Ac1g00578 Beta vulgaris HOM05D001685 ORTHO05D009095 3.2e-36 155.2 129 64.3
Glyma.17G254500 Glycine max HOM05D001685 ORTHO05D009095 3.2e-36 155.2 112 69.6
FvH4_2g38870 Fragaria vesca HOM05D001685 ORTHO05D009095 5.5e-36 154.5 128 67.2
Lalb_Chr14g0369641 Lupinus albus HOM05D001685 ORTHO05D009095 5.5e-36 154.5 114 70.2
CAN.G851.28 Capsicum annuum HOM05D001685 ORTHO05D009095 2.1e-35 152.5 128 63.3
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 2.1e-35 152.5 128 66.4
unitig_578.g16082 Utricularia gibba HOM05D001685 ORTHO05D009095 3.3e-33 145.2 117 62.4
Cpa.g.sc99.23 Carica papaya HOM05D001685 ORTHO05D009095 4.3e-33 144.8 111 69.4
Os03g0799700 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D009095 1.3e-32 143.3 125 57.6
Pp3c14_3560 Physcomitrium patens HOM05D001685 ORTHO05D009095 9.0e-31 137.1 126 58.7
Zm00001eb061130 Zea mays HOM05D001685 ORTHO05D009095 4.5e-30 134.8 114 61.4
Mapoly0009s0196 Marchantia polymorpha HOM05D001685 ORTHO05D009095 6.5e-29 131.0 118 59.3
AagrBONN_evm.TU.Sc2ySwM_344.1121 Anthoceros agrestis HOM05D001685 ORTHO05D009095 1.9e-28 129.4 120 57.5
Oeu046227.1 Olea europaea HOM05D001685 ORTHO05D009095 1.8e-26 122.9 98 66.3
TPR.G6019 Trifolium pratense HOM05D001685 ORTHO05D009095 1.8e-26 122.9 107 61.7
CBR_g20183 Chara braunii HOM05D001685 ORTHO05D009095 3.0e-26 122.1 116 54.3
SMO300G0022 Selaginella moellendorffii HOM05D001685 ORTHO05D009095 9.7e-25 117.1 119 53.8
Sed0028196 Sechium edule HOM05D001685 ORTHO05D009095 2.2e-24 115.9 100 61.0
GSVIVG01009798001 Vitis vinifera HOM05D001685 ORTHO05D009095 1.5e-22 109.8 80 72.5
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 2.5e-20 102.4 67 80.6
RcHm_v2.0_Chr7g0217061 Rosa chinensis HOM05D001685 ORTHO05D009095 2.1e-19 99.4 65 73.8
MD08G1022900 Malus domestica HOM05D001685 ORTHO05D246125 8.8e-10 67.4 137 40.9
Cre09.g395600 Chlamydomonas reinhardtii HOM05D001685 ORTHO05D009095 9.1e-07 57.4 147 31.3


User provided reference genes

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