Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 4.7e-144 514.6 277 100.0
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 8.5e-138 493.8 278 96.8
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 2.3e-111 406.0 277 75.8
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 3.1e-111 405.6 272 77.6
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 3.1e-111 405.6 277 76.2
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 1.5e-110 403.3 245 82.4
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 3.7e-109 398.7 252 80.2
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 8.3e-109 397.5 278 73.7
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 2.4e-108 396.0 252 81.0
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 3.5e-107 392.1 274 72.6
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.3e-106 390.2 276 74.6
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.1e-106 388.3 276 73.9
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 6.6e-106 387.9 278 72.7
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.3e-105 385.6 276 75.7
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 5.6e-105 384.8 252 77.8
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 5.6e-105 384.8 252 77.8
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 9.5e-105 384.0 252 77.8
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 2.8e-104 382.5 239 80.8
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 3.6e-104 382.1 274 72.6
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.6e-104 382.1 276 72.8
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 4.7e-104 381.7 275 70.9
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 4.7e-104 381.7 252 77.4
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 2.3e-103 379.4 292 69.2
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 3.1e-103 379.0 251 77.3
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 3.1e-103 379.0 251 77.3
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 6.8e-103 377.9 251 76.9
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 1.2e-102 377.1 249 75.9
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 2.6e-102 375.9 236 80.1
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 3.4e-102 375.6 244 77.9
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 3.4e-102 375.6 278 71.9
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 5.8e-102 374.8 247 76.5
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 1.7e-101 373.2 277 68.2
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 2.9e-101 372.5 285 69.5
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 1.9e-100 369.8 247 75.3
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 2.4e-100 369.4 285 68.8
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 2.4e-100 369.4 278 69.1
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 3.2e-100 369.0 227 81.9
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 5.4e-100 368.2 249 75.1
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 7.1e-100 367.9 278 69.1
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 7.1e-100 367.9 278 69.1
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 1.2e-99 367.1 271 71.2
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 1.6e-99 366.7 250 74.4
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 2.1e-99 366.3 278 68.3
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 2.1e-99 366.3 271 70.8
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 2.7e-99 365.9 252 74.2
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 3.5e-99 365.5 245 75.9
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 6.0e-99 364.8 278 68.3
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 1.0e-98 364.0 245 74.7
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 2.3e-98 362.8 245 76.3
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 3.9e-98 362.1 236 73.7
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 1.1e-97 360.5 247 75.3
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.1e-97 360.5 272 68.4
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 2.5e-97 359.4 278 67.3
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 7.3e-97 357.8 297 64.6
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 9.6e-97 357.5 246 74.4
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 2.8e-96 355.9 249 72.7
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 3.6e-96 355.5 236 74.6
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 4.7e-96 355.1 252 69.4
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 6.2e-96 354.8 241 75.1
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 8.1e-96 354.4 252 71.0
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 1.8e-95 353.2 252 70.2
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 3.1e-95 352.4 278 67.6
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.2e-94 350.5 236 73.3
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 1.5e-94 350.1 222 77.5
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 2.6e-94 349.4 248 71.0
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 4.4e-94 348.6 242 72.3
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 4.4e-94 348.6 253 70.0
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.7e-93 346.7 261 68.6
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 2.2e-93 346.3 267 67.0
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 2.9e-93 345.9 249 68.7
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 6.4e-93 344.7 229 73.4
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 8.4e-93 344.4 245 70.6
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 5.4e-92 341.7 253 68.4
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.6e-91 340.1 276 69.9
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.1e-91 339.7 213 78.9
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 4.6e-91 338.6 276 66.7
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 1.3e-90 337.0 212 79.7
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.7e-90 336.7 241 70.1
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 1.4e-87 327.0 256 65.6
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 4.0e-87 325.5 240 69.2
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 4.4e-86 322.0 210 77.6
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.2e-83 313.9 212 71.2
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 6.0e-83 311.6 213 71.8
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 7.9e-83 311.2 248 66.9
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 3.9e-82 308.9 188 82.4
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 6.2e-80 301.6 254 65.0
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 4.0e-79 298.9 252 63.5
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 4.0e-79 298.9 277 58.8
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 8.4e-77 291.2 419 43.0
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 4.8e-72 275.4 176 77.3
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 4.5e-70 268.9 245 55.5
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 6.5e-69 265.0 212 66.0
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 2.7e-67 259.6 232 53.4
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 3.9e-66 255.8 232 54.3
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.1e-65 254.2 171 71.3
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.1e-63 247.7 242 58.3
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 1.8e-58 230.3 195 65.6
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 6.3e-56 221.9 229 50.2
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 4.2e-52 209.1 185 62.7
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 6.3e-48 195.3 162 69.8
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 1.8e-47 193.7 167 61.7
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 6.5e-37 158.7 90 85.6
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 7.7e-30 135.2 89 69.7
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.4e-23 114.4 73 72.6
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 4.5e-22 109.4 73 76.7
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 1.1e-20 104.8 58 87.9
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 4.2e-20 102.8 96 51.0
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 7.2e-20 102.1 92 65.2
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 1.3e-16 91.3 70 68.6
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.6e-14 84.3 56 67.9
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 3.8e-13 79.7 49 77.6
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 6.6e-13 79.0 54 66.7
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.9e-12 77.4 51 70.6
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 9.5e-12 75.1 153 34.0
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.0e-09 67.4 86 50.0
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 3.2e-07 60.1 101 27.7
Actinidia07304 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.0e-06 57.4 43 74.4


User provided reference genes

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