Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.5e-101 372.9 188 100.0
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 7.0e-83 310.8 189 87.8
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.3e-73 280.0 188 80.9
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 2.3e-70 269.2 187 76.5
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 9.2e-35 151.0 201 45.3
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 3.5e-34 149.1 193 50.8
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.2e-31 140.6 201 44.8
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 5.8e-29 131.7 211 45.0
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.5e-26 122.5 191 43.5
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 3.5e-26 122.5 200 44.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.3e-25 120.6 191 43.5
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.7e-25 120.2 191 45.0
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 2.3e-25 119.8 190 43.2
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 5.1e-25 118.6 196 42.9
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.5e-24 117.1 197 43.7
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 2.5e-24 116.3 193 42.0
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 9.6e-24 114.4 199 41.2
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 3.6e-23 112.5 198 41.9
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 4.7e-23 112.1 202 41.6
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 8.1e-23 111.3 196 40.8
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 8.1e-23 111.3 196 40.8
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 1.1e-22 110.9 193 46.1
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 3.1e-22 109.4 195 39.0
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 4.0e-22 109.0 185 45.4
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.2e-21 107.5 196 39.8
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 1.5e-21 107.1 197 41.1
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 7.6e-21 104.8 200 38.5
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 1.7e-20 103.6 188 41.5
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.7e-20 103.6 191 44.0
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 3.8e-20 102.4 183 41.5
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.9e-20 102.1 198 39.4
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 4.9e-20 102.1 208 42.3
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 1.1e-19 100.9 196 40.3
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 4.2e-19 99.0 199 40.7
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 4.2e-19 99.0 202 38.6
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 5.4e-19 98.6 188 42.6
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 1.6e-18 97.1 211 37.4
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 2.7e-18 96.3 198 38.4
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.0e-18 95.1 194 38.7
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 6.6e-17 91.7 198 38.4
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 6.6e-17 91.7 200 38.0
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 8.7e-17 91.3 198 39.4
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 1.9e-16 90.1 195 39.5
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.6e-15 87.0 187 39.6
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.8e-14 83.6 205 37.1
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.4e-14 83.2 197 37.6
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.0e-14 82.4 192 38.0
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 5.3e-14 82.0 205 38.5
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 6.9e-14 81.6 212 37.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 6.9e-14 81.6 186 37.1
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 1.5e-13 80.5 194 35.6
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 2.0e-13 80.1 194 33.5
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.6e-13 79.7 183 36.1
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 4.5e-13 79.0 208 36.1
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 7.6e-13 78.2 196 33.2
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 2.2e-12 76.6 184 35.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 2.9e-12 76.3 111 47.7
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 2.9e-12 76.3 229 33.2
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 6.4e-12 75.1 179 32.4
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.4e-11 73.9 189 30.7
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.2e-11 72.8 216 30.1
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 4.2e-11 72.4 188 34.0
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 4.2e-11 72.4 174 35.6
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 9.3e-11 71.2 101 40.6
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 2.7e-10 69.7 181 32.6
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 3.5e-10 69.3 186 30.6
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 3.5e-10 69.3 172 33.1
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 4.6e-10 68.9 197 31.0
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 4.6e-10 68.9 203 33.0
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 6.0e-10 68.6 193 31.1
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 7.9e-10 68.2 190 37.9
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 7.9e-10 68.2 195 37.9
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 1.3e-09 67.4 196 30.1
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 1.3e-09 67.4 178 30.9
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 1.3e-09 67.4 178 30.9
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 1.3e-09 67.4 187 32.6
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 3.0e-09 66.2 188 31.9
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 3.0e-09 66.2 188 31.9
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 3.0e-09 66.2 191 32.5
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 5.1e-09 65.5 185 32.4
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 5.1e-09 65.5 202 29.7
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 6.7e-09 65.1 204 27.0
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 6.7e-09 65.1 178 33.7
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 8.7e-09 64.7 181 31.5
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 1.5e-08 63.9 184 30.4
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.3e-08 62.8 178 28.7
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 3.3e-08 62.8 192 27.1
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 4.3e-08 62.4 186 29.6
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 4.3e-08 62.4 185 27.6
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 4.3e-08 62.4 221 29.0
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 5.6e-08 62.0 192 28.6
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 7.4e-08 61.6 220 29.1
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 9.6e-08 61.2 189 29.1
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 1.3e-07 60.8 181 26.0
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 2.1e-07 60.1 186 33.3
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 3.7e-07 59.3 182 25.8
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 6.2e-07 58.5 194 26.8
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 6.2e-07 58.5 62 54.8
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 6.2e-07 58.5 197 26.4
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 8.1e-07 58.2 199 27.1
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 8.1e-07 58.2 204 27.5
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 1.1e-06 57.8 190 30.5
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 1.1e-06 57.8 190 32.1
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 1.1e-06 57.8 199 28.1
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.8e-06 57.0 183 29.5
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 1.8e-06 57.0 187 26.2
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 2.4e-06 56.6 217 27.2
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.4e-06 56.6 183 30.6
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 3.1e-06 56.2 192 29.2
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 6.9e-06 55.1 202 28.7
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 9.0e-06 54.7 201 28.4
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 9.0e-06 54.7 182 26.9


User provided reference genes

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