Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G222401 Populus trichocarpa HOM05D000118 ORTHO05D333008 9.3e-121 436.8 207 100.0
Sabra02G0032400 Salix brachista HOM05D000118 ORTHO05D000098 8.9e-23 111.3 80 65.0
Potri.002G040700 Populus trichocarpa HOM05D000118 ORTHO05D000098 7.5e-22 108.2 77 63.6
Potri.005G222300 Populus trichocarpa HOM05D000118 ORTHO05D000098 5.4e-20 102.1 77 61.0
Sabra05G0171000 Salix brachista HOM05D000118 ORTHO05D000098 5.4e-20 102.1 77 61.0
Duzib138G1751 Durio zibethinus HOM05D000118 ORTHO05D000098 6.8e-15 85.1 77 51.9
Thecc.01G261300 Theobroma cacao HOM05D000118 ORTHO05D000098 2.0e-14 83.6 77 48.1
Gorai.001G251800 Gossypium raimondii HOM05D000118 ORTHO05D000098 9.9e-14 81.3 79 48.1
Ciclev10023996m.g Citrus clementina HOM05D000118 ORTHO05D000098 1.3e-13 80.9 77 49.4
Manes.13G032400 Manihot esculenta HOM05D000118 ORTHO05D000098 2.9e-13 79.7 77 46.8
Gohir.A07G211400 Gossypium hirsutum HOM05D000118 ORTHO05D000098 1.1e-12 77.8 78 46.2
Gohir.D07G217600 Gossypium hirsutum HOM05D000118 ORTHO05D000098 3.2e-12 76.3 74 48.6
Dinv34606 Davidia involucrata HOM05D000118 ORTHO05D000098 2.1e-11 73.6 77 45.5
Sabra17G0111400 Salix brachista HOM05D000118 ORTHO05D000098 3.5e-11 72.8 170 31.8
Potri.017G135800 Populus trichocarpa HOM05D000118 ORTHO05D000098 4.6e-11 72.4 77 46.8
QL09p038073 Quercus lobata HOM05D000118 ORTHO05D000098 4.6e-11 72.4 77 45.5
Sabra17G0114400 Salix brachista HOM05D000118 ORTHO05D000098 6.0e-11 72.0 170 31.8
Dinv09316 Davidia involucrata HOM05D000118 ORTHO05D000098 7.8e-11 71.6 77 44.2
TWI12G0469 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 1.7e-10 70.5 76 42.1
TWI75G1285 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 1.7e-10 70.5 77 40.3
Cfa002403 Carpinus fangiana HOM05D000118 ORTHO05D000098 3.9e-10 69.3 78 44.9
CiPaw.03G261700 Carya illinoinensis HOM05D000118 ORTHO05D000098 5.1e-10 68.9 77 42.9
Ca_09692_v3 Cicer arietinum L. HOM05D000118 ORTHO05D000098 1.1e-09 67.8 76 43.4
arahy.Tifrunner.gnm1.ann1.BDK9W9 Arachis hypogaea HOM05D000118 ORTHO05D000098 1.5e-09 67.4 76 44.7
arahy.Tifrunner.gnm1.ann1.S9QE88 Arachis hypogaea HOM05D000118 ORTHO05D000098 1.5e-09 67.4 76 44.7
Haze_24599 Corylus avellana HOM05D000118 ORTHO05D000098 1.5e-09 67.4 78 43.6
CANSAT01G1309 Cannabis sativa HOM05D000118 ORTHO05D000098 1.9e-09 67.0 74 44.6
Lalb_Chr21g0313791 Lupinus albus HOM05D000118 ORTHO05D000098 1.9e-09 67.0 76 44.7
Psat6g055640 Pisum sativum HOM05D000118 ORTHO05D000098 1.9e-09 67.0 76 40.8
QL09p037971 Quercus lobata HOM05D000118 ORTHO05D000098 3.3e-09 66.2 77 42.9
TWI12G0159 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 3.3e-09 66.2 76 36.8
CiPaw.04G185200 Carya illinoinensis HOM05D000118 ORTHO05D000098 9.6e-09 64.7 77 41.6
Lj5g0005714 Lotus japonicus HOM05D000118 ORTHO05D000098 9.6e-09 64.7 74 43.2
Medtr1g070185 Medicago truncatula HOM05D000118 ORTHO05D000098 9.6e-09 64.7 76 40.8
QL09p038021 Quercus lobata HOM05D000118 ORTHO05D000098 9.6e-09 64.7 74 41.9
Dinv24383 Davidia involucrata HOM05D000118 ORTHO05D000098 1.2e-08 64.3 77 44.2
vmacro02649 Vaccinium macrocarpon HOM05D000118 ORTHO05D000098 1.2e-08 64.3 77 42.9
Actinidia08527 Actinidia chinensis HOM05D000118 ORTHO05D000098 2.1e-08 63.5 77 40.3
Dinv24380 Davidia involucrata HOM05D000118 ORTHO05D000098 2.1e-08 63.5 77 42.9
RcHm_v2.0_Chr6g0288551 Rosa chinensis HOM05D000118 ORTHO05D000098 2.8e-08 63.2 77 41.6
Sed0016608 Sechium edule HOM05D000118 ORTHO05D000098 2.8e-08 63.2 77 39.0
RcHm_v2.0_Chr3g0455441 Rosa chinensis HOM05D000118 ORTHO05D000098 3.6e-08 62.8 77 40.3
Sed0005599 Sechium edule HOM05D000118 ORTHO05D000098 3.6e-08 62.8 77 40.3
TPR.G3558 Trifolium pratense HOM05D000118 ORTHO05D000098 3.6e-08 62.8 76 39.5
MSTRG.18312 Avicennia marina HOM05D000118 ORTHO05D000098 4.7e-08 62.4 77 41.6
Dinv24382 Davidia involucrata HOM05D000118 ORTHO05D000098 4.7e-08 62.4 77 41.6
Hma1.2p1_0747F.1_g212440 Hydrangea macrophylla HOM05D000118 ORTHO05D000098 4.7e-08 62.4 77 40.3
TWI12G0715 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 6.2e-08 62.0 76 36.8
Cc01_g18490 Coffea canephora HOM05D000118 ORTHO05D000098 1.1e-07 61.2 77 39.0
Glyma.13G121700 Glycine max HOM05D000118 ORTHO05D000098 1.1e-07 61.2 76 40.8
Aqoxy5G00258 Aquilegia oxysepala HOM05D000118 ORTHO05D000098 1.4e-07 60.8 76 39.5
EL10Ac5g10420 Beta vulgaris HOM05D000118 ORTHO05D000098 1.4e-07 60.8 74 41.9
Dinv22422 Davidia involucrata HOM05D000118 ORTHO05D000098 2.4e-07 60.1 77 40.3
TWI12G0512 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 2.4e-07 60.1 76 34.2
GSVIVG01028299001 Vitis vinifera HOM05D000118 ORTHO05D000098 2.4e-07 60.1 77 36.4
Dinv22426 Davidia involucrata HOM05D000118 ORTHO05D000098 5.3e-07 58.9 77 41.6
Dinv34604 Davidia involucrata HOM05D000118 ORTHO05D000098 5.3e-07 58.9 77 37.7
Dinv22428 Davidia involucrata HOM05D000118 ORTHO05D000098 6.9e-07 58.5 77 40.3
ClCG09G007680 Citrullus lanatus HOM05D000118 ORTHO05D000098 9.0e-07 58.2 77 35.1
Lj4A588T34 Lonicera japonica HOM05D000118 ORTHO05D000098 9.0e-07 58.2 78 38.5
Lj4A600T33 Lonicera japonica HOM05D000118 ORTHO05D000098 9.0e-07 58.2 78 38.5
Dinv34603 Davidia involucrata HOM05D000118 ORTHO05D000098 1.5e-06 57.4 77 37.7
SalBow4G0054 Salvia bowleyana HOM05D000118 ORTHO05D000098 1.5e-06 57.4 75 38.7
SalBow4G3341 Salvia bowleyana HOM05D000118 ORTHO05D000098 1.5e-06 57.4 75 38.7
Dinv22425 Davidia involucrata HOM05D000118 ORTHO05D000098 2.0e-06 57.0 77 40.3
Dinv22430 Davidia involucrata HOM05D000118 ORTHO05D000098 2.6e-06 56.6 77 37.7
Dinv34605 Davidia involucrata HOM05D000118 ORTHO05D000098 2.6e-06 56.6 77 36.4
Eucgr.L02699 Eucalyptus grandis HOM05D000118 ORTHO05D000098 2.6e-06 56.6 76 36.8
Lsat_1_v5_gn_9_8761 Lactuca sativa HOM05D000118 ORTHO05D000098 2.6e-06 56.6 77 33.8
Nitab4.5_0001044g0200 Nicotiana tabacum HOM05D000118 ORTHO05D000098 2.6e-06 56.6 77 35.1
CANSAT01G2768 Cannabis sativa HOM05D000118 ORTHO05D000098 3.4e-06 56.2 77 32.5
ECA247G0407 Erigeron canadensis HOM05D000118 ORTHO05D000098 3.4e-06 56.2 77 33.8
Eucgr.K03278 Eucalyptus grandis HOM05D000118 ORTHO05D000098 3.4e-06 56.2 76 36.8
Lj4A583T47 Lonicera japonica HOM05D000118 ORTHO05D000098 3.4e-06 56.2 78 41.0
Lj4A586T22 Lonicera japonica HOM05D000118 ORTHO05D000098 3.4e-06 56.2 78 41.0
Cc02_g37350 Coffea canephora HOM05D000118 ORTHO05D000098 4.4e-06 55.8 78 37.2
Eucgr.K03271 Eucalyptus grandis HOM05D000118 ORTHO05D000098 4.4e-06 55.8 76 40.8
Lj9A640T59 Lonicera japonica HOM05D000118 ORTHO05D000098 4.4e-06 55.8 77 39.0
RcHm_v2.0_Chr6g0288661 Rosa chinensis HOM05D000118 ORTHO05D000098 4.4e-06 55.8 74 39.2
COL.COLO4_05163 Corchorus olitorius HOM05D000118 ORTHO05D000098 5.8e-06 55.5 52 48.1
Dinv22434 Davidia involucrata HOM05D000118 ORTHO05D000098 5.8e-06 55.5 76 38.2
Hma1.2p1_0747F.1_g212460 Hydrangea macrophylla HOM05D000118 ORTHO05D000098 5.8e-06 55.5 77 36.4
Potri.004G083100 Populus trichocarpa HOM05D000118 ORTHO05D000098 5.8e-06 55.5 76 35.5
Eucgr.K03275 Eucalyptus grandis HOM05D000118 ORTHO05D000098 7.6e-06 55.1 76 36.8
Lj4A582T52 Lonicera japonica HOM05D000118 ORTHO05D000098 7.6e-06 55.1 78 41.0
Prupe.8G226500 Prunus persica HOM05D000118 ORTHO05D000098 7.6e-06 55.1 79 34.2
Actinidia12886 Actinidia chinensis HOM05D000118 ORTHO05D000098 9.9e-06 54.7 156 26.3
Migut.D00997 Erythranthe guttata HOM05D000118 ORTHO05D000098 9.9e-06 54.7 77 36.4
Lj4A585T50 Lonicera japonica HOM05D000118 ORTHO05D000098 9.9e-06 54.7 78 41.0
SalBow4G2918 Salvia bowleyana HOM05D000118 ORTHO05D000098 9.9e-06 54.7 78 34.6


User provided reference genes

Program Settings