Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 8.1e-75 283.9 167 100.0
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 3.1e-66 255.4 167 88.6
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 7.1e-47 191.0 180 58.9
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 1.8e-45 186.4 171 63.7
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 2.3e-45 186.0 172 61.6
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 5.1e-45 184.9 138 69.6
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 8.7e-45 184.1 176 67.0
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.6e-43 179.9 168 66.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 6.3e-43 177.9 169 60.4
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 8.2e-43 177.6 177 57.1
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.4e-42 176.8 169 66.3
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 2.4e-42 176.0 174 55.7
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.2e-41 173.7 172 58.7
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.2e-41 173.7 183 59.6
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.2e-41 173.7 174 65.5
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.6e-41 172.6 173 66.5
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 3.4e-41 172.2 179 54.7
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.9e-41 171.4 174 59.8
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 7.6e-41 171.0 168 61.3
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.0e-40 170.6 134 67.9
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.0e-40 170.6 169 58.6
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 2.2e-40 169.5 169 68.6
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 2.2e-40 169.5 139 69.1
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.9e-40 169.1 185 60.0
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 2.9e-40 169.1 168 55.4
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 3.8e-40 168.7 169 58.0
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 3.8e-40 168.7 177 54.2
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 5.0e-40 168.3 169 62.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 5.0e-40 168.3 174 57.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 6.5e-40 167.9 127 70.1
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.9e-39 166.4 166 65.1
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.5e-39 166.0 132 69.7
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 7.2e-39 164.5 140 63.6
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 9.3e-39 164.1 170 65.9
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 9.3e-39 164.1 131 71.0
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.1e-38 162.9 168 64.9
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.1e-38 162.9 168 60.1
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.7e-38 162.5 179 60.3
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 3.6e-38 162.2 184 54.9
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 4.6e-38 161.8 179 58.7
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 6.7e-37 157.9 182 58.2
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.5e-36 156.8 177 52.5
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.5e-36 156.8 139 61.9
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.5e-36 156.0 137 62.8
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.3e-36 155.6 168 55.4
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 4.3e-36 155.2 174 54.0
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 7.4e-36 154.5 169 63.3
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.2e-35 152.9 182 53.3
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 2.2e-35 152.9 128 61.7
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 8.2e-35 151.0 140 59.3
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.2e-33 147.1 180 48.9
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.3e-32 143.7 138 56.5
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 2.9e-32 142.5 188 47.9
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.4e-31 140.2 169 60.4
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.9e-31 139.8 133 55.6
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 4.2e-31 138.7 123 61.8
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 4.2e-31 138.7 140 57.1
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.6e-30 135.6 112 66.1
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 4.7e-30 135.2 178 57.9
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 4.7e-30 135.2 132 57.6
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.8e-29 133.3 123 56.1
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.8e-29 133.3 138 52.9
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.3e-29 132.9 141 55.3
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 3.0e-29 132.5 134 55.2
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 3.9e-29 132.1 137 56.2
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 3.9e-29 132.1 120 61.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 5.1e-29 131.7 124 57.3
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 5.1e-29 131.7 133 53.4
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 6.7e-29 131.3 131 58.0
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 8.8e-29 131.0 123 55.3
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.1e-28 130.6 138 51.4
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.1e-28 130.6 138 51.4
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.1e-28 130.6 138 51.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.1e-28 130.6 176 48.9
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 2.0e-28 129.8 140 52.1
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 2.6e-28 129.4 133 52.6
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.6e-28 129.4 133 52.6
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 3.3e-28 129.0 193 47.2
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.2e-27 126.3 181 45.9
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 3.7e-27 125.6 137 56.9
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.1e-26 124.0 138 52.2
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.8e-26 123.2 176 46.6
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 6.9e-26 121.3 167 52.7
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 1.5e-25 120.2 123 56.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.6e-25 119.4 184 45.1
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.7e-24 116.7 167 51.5
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 2.9e-24 115.9 182 45.6
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 1.1e-23 114.0 144 49.3
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.2e-22 110.5 148 47.3
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.7e-22 108.6 177 43.5
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 4.4e-20 102.1 123 46.3
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.2e-19 97.8 178 42.7
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 1.4e-18 97.1 150 44.7
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 1.8e-18 96.7 182 41.2
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 4.5e-17 92.0 110 51.8
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 6.5e-16 88.2 74 68.9
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 4.2e-15 85.5 180 41.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 5.5e-15 85.1 179 38.5
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 1.4e-13 80.5 131 42.0
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.6e-12 76.3 132 44.7
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.8e-11 72.8 176 34.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.8e-11 72.8 176 34.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 2.4e-10 69.7 158 34.2
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 9.1e-10 67.8 78 56.4
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 1.2e-09 67.4 170 41.2
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 2.7e-09 66.2 75 46.7
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 5.9e-09 65.1 137 36.5
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.2e-06 57.4 131 35.9


User provided reference genes

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