Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 2.7e-208 728.4 366 100.0
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 3.8e-186 654.8 421 82.9
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 2.6e-158 562.4 364 80.5
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.1e-153 547.0 366 78.4
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 2.1e-152 542.7 362 78.2
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.7e-152 541.6 368 76.4
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.3e-151 539.3 367 76.3
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 5.2e-151 538.1 367 76.3
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.2e-150 537.0 321 84.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 2.9e-149 532.3 369 75.6
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 2.9e-149 532.3 360 77.5
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 3.7e-149 531.9 377 75.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 4.9e-149 531.6 365 76.2
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 8.3e-149 530.8 369 75.9
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 4.1e-148 528.5 367 74.1
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 2.1e-147 526.2 331 81.0
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 6.0e-147 524.6 368 74.5
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.0e-146 523.9 315 84.1
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.3e-146 523.5 369 75.3
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.5e-145 520.0 364 73.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.9e-145 519.6 339 79.1
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 5.6e-145 518.1 369 74.5
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 9.5e-145 517.3 360 74.7
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.2e-144 516.9 306 85.3
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.1e-144 516.2 367 74.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 2.8e-144 515.8 319 81.8
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 3.6e-144 515.4 347 77.2
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 4.7e-144 515.0 364 73.6
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 4.0e-143 511.9 368 73.1
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.0e-143 511.9 317 82.3
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.5e-142 510.0 363 74.4
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 2.6e-142 509.2 369 72.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 2.6e-142 509.2 365 71.8
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 5.8e-142 508.1 358 73.7
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 5.8e-142 508.1 364 74.2
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 7.6e-142 507.7 317 80.8
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 2.9e-141 505.8 323 79.3
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 2.9e-141 505.8 317 81.1
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.7e-141 505.4 364 74.5
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 3.7e-141 505.4 317 81.1
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 4.9e-141 505.0 354 73.7
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 8.4e-141 504.2 317 80.8
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 2.4e-140 502.7 322 80.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 5.4e-140 501.5 328 79.6
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 9.2e-140 500.7 343 73.8
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.2e-139 500.4 330 76.1
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.2e-139 500.4 359 73.5
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.1e-139 499.6 325 76.6
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.1e-139 499.6 309 80.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.1e-139 499.6 351 74.1
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.5e-139 498.8 348 74.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 4.6e-139 498.4 332 79.5
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 4.6e-139 498.4 345 74.8
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 7.8e-139 497.7 367 71.4
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.3e-138 496.9 325 76.3
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 3.9e-138 495.4 316 78.8
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 8.6e-138 494.2 363 72.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.1e-137 493.8 308 78.9
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.5e-137 492.7 308 79.2
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.3e-137 492.3 335 72.8
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 4.3e-137 491.9 308 78.6
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.3e-137 491.9 368 71.2
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 5.6e-137 491.5 303 79.5
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.6e-137 491.5 347 74.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 7.3e-137 491.1 353 72.8
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 7.3e-137 491.1 325 76.0
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 9.6e-137 490.7 365 71.0
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 9.6e-137 490.7 303 81.2
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 3.6e-136 488.8 308 78.6
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 3.6e-136 488.8 308 78.6
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.1e-135 487.3 312 80.1
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 3.4e-134 482.3 301 79.4
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 3.8e-133 478.8 304 79.6
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.4e-132 476.9 299 80.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.6e-131 473.4 370 68.4
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 6.0e-131 471.5 287 80.5
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.7e-130 469.9 275 83.6
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 5.1e-130 468.4 460 58.0
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.1e-129 467.2 366 68.9
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 3.2e-124 449.1 302 74.8
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 3.0e-122 442.6 302 73.2
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.1e-119 434.1 471 54.1
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 5.8e-118 428.3 268 78.7
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 7.1e-116 421.4 311 68.8
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.6e-115 420.2 305 69.5
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.3e-114 417.2 309 69.6
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.1e-112 409.8 318 66.7
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 3.7e-112 409.1 294 73.5
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.5e-108 396.4 450 52.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.1e-107 393.3 290 67.6
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 6.7e-106 388.3 211 90.0
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.3e-101 374.0 305 64.6
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.5e-97 359.8 369 58.0
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.1e-95 352.4 210 84.8
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 3.9e-90 335.9 201 82.6
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.3e-85 320.9 251 69.7
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.3e-85 320.9 251 69.7
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.3e-85 320.9 319 53.9
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 6.5e-85 318.5 169 92.9
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.7e-81 304.7 204 77.5
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 6.5e-77 292.0 163 89.6
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 3.2e-76 289.7 314 53.8
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 7.2e-76 288.5 195 76.9
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.6e-75 287.3 195 76.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 6.7e-74 282.0 167 83.2
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.5e-73 280.8 189 77.8
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.5e-70 269.6 258 51.6
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.5e-70 269.6 151 86.1
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.4e-63 247.7 219 61.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.4e-63 246.9 188 67.6
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 9.1e-63 245.0 144 81.9
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.0e-58 229.6 271 45.8
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.4e-57 226.1 141 78.0
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.0e-45 186.0 108 86.1
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.2e-38 164.9 97 78.4
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 3.1e-34 150.2 127 62.2
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 3.4e-33 146.7 238 35.7
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.0e-29 135.2 80 83.8
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.8e-25 119.4 258 34.1
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.3e-21 108.2 104 51.0
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 2.7e-14 84.0 48 79.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.1e-10 72.0 47 76.6
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 9.0e-10 68.9 144 36.8


User provided reference genes

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