Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-66 256.5 153 100.0
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.5e-35 153.3 102 76.5
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.7e-26 123.2 88 68.2
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-20 103.6 67 70.1
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.5e-19 100.1 67 67.2
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.6e-19 99.4 76 65.8
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 9.2e-17 90.9 52 82.7
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-16 90.5 70 62.9
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 2.7e-16 89.4 72 62.5
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.6e-16 88.6 86 54.7
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 6.0e-16 88.2 67 61.2
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.0e-16 88.2 70 64.3
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.8e-16 87.8 92 53.3
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.0e-15 87.4 78 55.1
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.7e-15 86.7 65 63.1
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.7e-15 86.7 66 62.1
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.3e-15 86.3 72 61.1
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.0e-15 85.9 74 58.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.9e-15 85.5 104 46.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.6e-15 84.7 68 61.8
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 6.6e-15 84.7 54 72.2
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-14 84.0 78 56.4
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.1e-14 84.0 72 55.6
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.5e-14 83.6 62 62.9
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.5e-14 83.6 70 58.6
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.5e-14 83.6 57 68.4
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.5e-14 83.6 67 59.7
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 5.6e-14 81.6 70 58.6
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.6e-14 81.6 88 51.1
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.6e-14 81.6 70 57.1
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.6e-14 81.6 70 58.6
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 5.6e-14 81.6 86 51.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.3e-14 81.3 70 58.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.3e-14 81.3 59 66.1
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 7.3e-14 81.3 59 66.1
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-13 80.5 85 51.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.6e-13 80.1 49 71.4
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-13 79.7 70 57.1
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 2.1e-13 79.7 76 44.7
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.8e-13 79.3 56 66.1
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-13 79.3 61 60.7
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-13 79.3 61 60.7
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.8e-13 79.3 70 57.1
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.8e-13 79.3 66 59.1
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.6e-13 79.0 61 60.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 3.6e-13 79.0 56 64.3
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 3.6e-13 79.0 56 64.3
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-13 79.0 59 61.0
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-13 79.0 59 61.0
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-13 79.0 59 61.0
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.6e-13 79.0 65 58.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.6e-13 79.0 65 58.5
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.7e-13 78.6 68 52.9
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 6.2e-13 78.2 67 59.7
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.2e-13 78.2 70 55.7
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.2e-13 78.2 70 55.7
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.1e-13 77.8 72 54.2
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 1.1e-12 77.4 96 42.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.8e-12 76.6 65 58.5
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.8e-12 76.6 70 55.7
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.8e-12 76.6 54 63.0
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-12 76.6 72 54.2
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-12 76.3 70 54.3
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 3.1e-12 75.9 64 57.8
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-12 75.9 72 52.8
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-12 75.9 72 52.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 4.0e-12 75.5 68 55.9
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 6.8e-12 74.7 76 48.7
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 8.9e-12 74.3 50 64.0
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.9e-12 74.3 100 42.0
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 8.9e-12 74.3 63 57.1
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.2e-11 73.9 55 63.6
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.5e-11 73.6 54 64.8
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.5e-11 73.6 57 57.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-11 73.2 49 65.3
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.0e-11 73.2 71 52.1
EL10Ac1g01573 Beta vulgaris HOM05D002879 ORTHO05D002930 2.6e-11 72.8 76 48.7
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.6e-11 72.8 56 62.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.6e-11 72.8 67 46.3
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.6e-11 72.8 74 55.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.6e-11 72.8 49 67.3
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.8e-11 71.6 54 63.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.8e-11 71.6 44 72.7
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 7.6e-11 71.2 47 68.1
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 7.6e-11 71.2 66 53.0
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 7.6e-11 71.2 70 52.9
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 9.9e-11 70.9 54 61.1
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-10 70.1 68 50.0
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 2.2e-10 69.7 69 49.3
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.2e-10 69.7 87 48.3
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.8e-10 68.9 63 54.0
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.8e-10 68.9 45 66.7
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.4e-10 68.2 72 51.4
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 6.4e-10 68.2 71 47.9
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.4e-10 67.8 65 52.3
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.1e-09 67.4 91 46.2
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-09 67.4 51 60.8
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-09 67.0 67 49.3
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.4e-09 67.0 74 50.0
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.9e-09 66.6 49 63.3
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.9e-09 66.6 64 56.2
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.9e-09 66.6 53 60.4
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 2.4e-09 66.2 65 49.2
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.4e-09 66.2 46 60.9
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.4e-09 66.2 48 64.6
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.4e-09 66.2 58 53.4
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.4e-09 66.2 58 56.9
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-09 66.2 48 62.5
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.1e-09 65.5 48 66.7
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.1e-09 65.5 45 66.7
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.1e-09 65.5 74 50.0
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.4e-09 65.1 50 60.0
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.1e-09 64.7 48 60.4
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.1e-09 64.7 43 67.4
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 7.1e-09 64.7 104 39.4
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-08 63.9 43 67.4
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.6e-08 63.5 48 66.7
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-08 63.2 38 76.3
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.7e-08 62.8 48 58.3
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.7e-08 62.8 56 55.4
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 2.7e-08 62.8 49 59.2
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.7e-08 62.8 48 60.4
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.5e-08 62.4 65 50.8
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 3.5e-08 62.4 48 60.4
Potri.005G193600 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.5e-08 62.4 100 40.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 3.5e-08 62.4 59 50.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.6e-08 62.0 48 58.3
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.0e-08 61.6 47 57.4
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-08 61.6 100 37.0
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 7.8e-08 61.2 46 58.7
Os01g0959200 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 7.8e-08 61.2 78 47.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.3e-07 60.5 73 45.2
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-07 60.5 47 59.6
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 1.7e-07 60.1 117 34.2
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-07 59.3 46 60.9
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-07 59.3 46 60.9
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-07 59.3 46 60.9
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-07 59.3 46 60.9
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 6.6e-07 58.2 47 57.4
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.6e-07 58.2 96 38.5
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.6e-07 58.2 96 38.5
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 8.6e-07 57.8 56 50.0
Mapoly0741s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 8.6e-07 57.8 64 45.3
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 8.6e-07 57.8 45 57.8
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 8.6e-07 57.8 45 57.8
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.1e-06 57.4 46 56.5
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-06 57.4 70 41.4
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 1.1e-06 57.4 73 49.3
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 1.1e-06 57.4 43 60.5
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 1.1e-06 57.4 63 47.6
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-06 57.0 53 50.9
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-06 57.0 40 60.0
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.5e-06 57.0 124 33.1
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.9e-06 56.6 56 46.4
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.5e-06 56.2 71 42.3
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-06 56.2 69 46.4
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-06 55.8 66 47.0
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.3e-06 55.5 56 51.8
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.3e-06 55.5 40 57.5
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 4.3e-06 55.5 54 48.1
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 5.6e-06 55.1 43 55.8
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.6e-06 55.1 60 45.0
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.3e-06 54.7 65 47.7
Mapoly0798s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 9.6e-06 54.3 76 43.4
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 9.6e-06 54.3 60 48.3


User provided reference genes

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