Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.0e-54 215.7 102 100.0
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.2e-36 155.2 102 76.5
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.7e-24 115.2 103 58.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.0e-23 110.9 67 73.1
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.7e-22 107.5 67 70.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.4e-18 96.7 104 51.0
Potri.005G193600 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.0e-18 95.5 100 53.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.5e-17 93.2 52 80.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.0e-17 92.8 142 41.5
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-17 92.8 67 67.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.6e-17 92.4 65 64.6
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.4e-17 92.0 92 54.3
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.4e-17 92.0 67 64.2
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.7e-16 89.7 120 46.7
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.8e-16 89.0 68 60.3
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.7e-16 88.6 67 59.7
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 6.3e-16 87.8 102 47.1
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 8.3e-16 87.4 105 50.5
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.3e-16 87.4 84 52.4
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.4e-15 85.9 62 59.7
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 2.4e-15 85.9 96 44.8
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-15 85.5 67 59.7
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-15 85.5 67 61.2
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.1e-15 85.1 61 60.7
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-14 83.6 67 59.7
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.2e-14 83.6 50 70.0
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.6e-14 83.2 97 47.4
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.7e-14 82.4 51 68.6
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.7e-14 82.4 51 68.6
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.7e-14 82.4 67 56.7
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.7e-14 82.4 51 70.6
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-14 82.0 79 53.2
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.5e-14 82.0 90 48.9
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.5e-14 82.0 67 58.2
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.5e-14 82.0 67 58.2
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.5e-14 81.6 61 57.4
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.5e-14 81.6 61 57.4
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 4.5e-14 81.6 51 68.6
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.9e-14 81.3 67 53.7
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 7.7e-14 80.9 87 51.7
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.7e-14 80.9 81 51.9
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 7.7e-14 80.9 51 64.7
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.0e-13 80.5 67 58.2
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-13 80.1 67 56.7
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.3e-13 80.1 68 48.5
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-13 80.1 67 56.7
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.7e-13 79.7 79 50.6
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-13 79.3 92 48.9
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.8e-13 78.6 100 43.0
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.8e-13 78.6 64 59.4
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.5e-13 77.8 83 50.6
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 8.5e-13 77.4 67 55.2
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.5e-12 76.6 99 43.4
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.5e-12 76.6 48 68.8
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.9e-12 76.3 68 52.9
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.9e-12 76.3 68 52.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.5e-12 75.9 48 66.7
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 2.5e-12 75.9 53 60.4
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-12 75.9 66 54.5
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-12 75.9 66 54.5
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.2e-12 75.5 52 61.5
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.2e-12 75.5 86 48.8
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 4.2e-12 75.1 71 49.3
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.2e-12 75.1 106 45.3
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 7.2e-12 74.3 62 54.8
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 7.2e-12 74.3 91 47.3
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 9.4e-12 73.9 87 47.1
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.4e-12 73.9 76 47.4
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.4e-12 73.9 87 43.7
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 9.4e-12 73.9 74 51.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 9.4e-12 73.9 74 51.4
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.2e-11 73.6 83 49.4
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.2e-11 73.6 90 48.9
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.2e-11 73.6 66 53.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.6e-11 73.2 80 48.8
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.6e-11 73.2 45 68.9
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.6e-11 73.2 67 52.2
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.1e-11 72.8 101 40.6
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.6e-11 72.0 83 44.6
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.6e-11 72.0 79 45.6
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.6e-11 72.0 48 64.6
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-11 71.6 79 45.6
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 6.1e-11 71.2 81 46.9
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 8.0e-11 70.9 49 63.3
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.0e-10 70.5 53 62.3
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.0e-10 70.5 48 62.5
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 1.4e-10 70.1 118 38.1
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.4e-10 70.1 83 49.4
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.8e-10 69.7 84 46.4
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-10 69.3 48 62.5
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-10 68.9 52 59.6
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 4.0e-10 68.6 66 48.5
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 4.0e-10 68.6 49 61.2
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-10 68.6 46 63.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-10 68.6 44 65.9
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 5.2e-10 68.2 102 37.3
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 5.2e-10 68.2 91 38.5
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.8e-10 67.8 66 51.5
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 6.8e-10 67.8 46 58.7
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 6.8e-10 67.8 46 60.9
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 8.8e-10 67.4 45 66.7
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.2e-09 67.0 83 44.6
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.2e-09 67.0 76 44.7
Mapoly0741s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 1.5e-09 66.6 91 42.9
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.0e-09 66.2 44 63.6
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.0e-09 66.2 48 60.4
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.6e-09 65.9 44 68.2
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.4e-09 65.5 47 55.3
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.4e-09 65.5 38 78.9
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.4e-09 65.1 44 63.6
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 4.4e-09 65.1 98 41.8
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 5.7e-09 64.7 75 45.3
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.7e-09 64.7 48 62.5
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.7e-09 64.7 74 45.9
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.7e-09 64.7 106 36.8
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 5.7e-09 64.7 45 62.2
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.5e-09 64.3 96 39.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.5e-09 64.3 96 39.6
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 9.8e-09 63.9 59 50.8
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 9.8e-09 63.9 87 46.0
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-08 63.5 74 43.2
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-08 63.5 74 43.2
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-08 63.5 74 43.2
Os01g0959200 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.3e-08 63.5 83 45.8
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.3e-08 63.5 79 44.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.7e-08 63.2 60 51.7
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 2.2e-08 62.8 53 54.7
EL10Ac1g01573 Beta vulgaris HOM05D002879 ORTHO05D002930 2.8e-08 62.4 91 37.4
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 3.7e-08 62.0 52 55.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.9e-08 61.6 44 56.8
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 4.9e-08 61.6 65 44.6
Mapoly0798s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 4.9e-08 61.6 90 41.1
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.9e-08 61.6 45 60.0
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 6.3e-08 61.2 55 49.1
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 8.3e-08 60.8 98 39.8
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.3e-08 60.8 43 58.1
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 8.3e-08 60.8 61 44.3
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-07 60.5 67 43.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.1e-07 60.5 43 58.1
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 47 55.3
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.4e-07 60.1 48 54.2
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.8e-07 59.7 43 55.8
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.8e-07 59.7 82 35.4
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-07 59.7 57 49.1
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-07 59.7 47 55.3
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.4e-07 59.3 66 43.9
Mapoly0098s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 2.4e-07 59.3 96 38.5
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.1e-07 58.9 80 42.5
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 5.4e-07 58.2 40 60.0
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 5.4e-07 58.2 153 27.5
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 7.0e-07 57.8 43 58.1
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 9.2e-07 57.4 51 49.0
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 9.2e-07 57.4 43 58.1
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 9.2e-07 57.4 43 55.8
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.2e-06 57.0 78 38.5
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.2e-06 57.0 43 55.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.6e-06 56.6 68 44.1
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-06 56.2 97 35.1
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.0e-06 56.2 46 50.0
Mapoly0080s0097 Marchantia polymorpha HOM05D019730 ORTHO05D022910 2.0e-06 56.2 60 53.3
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 2.0e-06 56.2 53 50.9
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.7e-06 55.8 40 55.0
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 2.7e-06 55.8 66 42.4
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 2.7e-06 55.8 44 54.5
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-06 55.8 47 53.2
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-06 55.5 47 46.8
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.5e-06 55.5 46 56.5
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.5e-06 55.5 46 56.5
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.5e-06 55.1 80 42.5
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.5e-06 55.1 110 36.4
SMO197G0116 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 4.5e-06 55.1 66 42.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 5.9e-06 54.7 88 38.6
SMO351G0439 Selaginella moellendorffii HOM05D002879 ORTHO05D002930 7.7e-06 54.3 50 54.0
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.7e-06 54.3 37 62.2


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