Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 7.7e-191 670.2 321 100.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.7e-172 607.8 322 90.7
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.5e-162 576.2 323 84.8
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.6e-148 528.5 328 77.4
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.6e-146 522.3 327 75.5
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.1e-144 516.9 328 74.7
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 2.4e-144 515.8 322 80.4
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.4e-144 515.8 326 75.2
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 5.4e-144 514.6 328 74.4
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 7.1e-144 514.2 328 74.1
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 7.1e-144 514.2 328 74.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 7.1e-144 514.2 328 74.4
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.6e-143 513.1 328 75.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 3.5e-143 511.9 326 74.8
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 4.6e-143 511.5 326 74.5
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.0e-142 510.4 326 73.9
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.7e-142 509.6 328 74.7
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 8.7e-142 507.3 328 74.7
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.9e-141 506.1 328 72.9
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 2.5e-141 505.8 328 72.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 3.3e-141 505.4 327 73.4
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.3e-141 505.4 327 74.3
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 3.3e-141 505.4 326 73.0
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 5.6e-141 504.6 326 73.6
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 9.6e-141 503.8 328 72.9
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.2e-140 503.4 328 73.5
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.2e-140 503.4 327 74.9
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.1e-140 502.7 328 73.8
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.8e-140 502.3 327 72.2
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.7e-140 501.5 317 76.3
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 4.7e-140 501.5 317 76.3
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.2e-140 501.1 328 71.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 6.2e-140 501.1 328 74.4
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.1e-139 500.4 328 72.0
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.1e-139 500.4 329 72.0
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.4e-139 500.0 327 71.9
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.1e-139 498.8 329 72.6
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 6.9e-139 497.7 328 71.3
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.9e-139 497.7 328 72.6
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.5e-138 496.5 320 74.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.0e-138 496.1 327 72.5
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.6e-138 495.7 329 72.3
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.6e-138 495.7 328 71.0
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.4e-138 495.4 328 72.3
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 9.9e-138 493.8 325 71.1
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.9e-137 492.3 328 72.0
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 4.9e-137 491.5 328 71.0
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.1e-136 490.3 328 70.1
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 6.0e-135 484.6 330 70.0
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 6.0e-135 484.6 325 70.8
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 3.9e-134 481.9 330 70.3
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 6.6e-134 481.1 330 70.0
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.6e-134 481.1 329 70.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.1e-133 480.3 341 70.4
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 5.6e-133 478.0 328 69.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 5.6e-133 478.0 327 70.6
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 9.6e-133 477.2 330 69.1
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 9.6e-133 477.2 308 72.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.3e-132 476.9 335 68.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.6e-132 476.5 326 70.2
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 2.1e-132 476.1 328 67.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.8e-132 475.7 330 69.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.8e-131 473.0 330 69.1
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 5.3e-131 471.5 325 68.9
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.2e-130 470.3 330 69.1
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 2.0e-130 469.5 346 66.5
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 3.4e-130 468.8 328 68.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.7e-129 466.5 341 66.3
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.1e-128 463.8 338 66.6
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.4e-128 463.4 331 66.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 1.9e-128 463.0 317 70.3
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.4e-128 462.6 328 68.3
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 4.2e-128 461.8 328 68.6
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 4.2e-128 461.8 328 70.7
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 5.4e-128 461.5 322 70.5
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 9.3e-128 460.7 328 67.4
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.7e-127 459.1 327 66.7
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 4.3e-125 451.8 310 69.4
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.7e-124 448.7 326 66.9
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 6.2e-124 448.0 326 66.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 4.0e-123 445.3 328 63.1
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 6.9e-123 444.5 323 65.6
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 4.9e-121 438.3 328 64.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 6.4e-121 438.0 328 64.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.4e-120 436.8 315 66.0
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.2e-120 435.6 312 67.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.7e-119 432.6 328 63.4
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.9e-118 428.7 326 62.0
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-112 409.1 253 75.9
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.2e-112 409.1 327 59.9
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 5.5e-112 408.3 327 59.9
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 7.4e-109 397.9 328 58.5
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 7.7e-106 387.9 236 76.3
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.0e-105 387.5 276 63.4
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 5.0e-105 385.2 308 58.4
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 9.4e-104 380.9 254 70.9
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.2e-103 380.6 256 70.3
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 1.6e-103 380.2 306 61.1
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.7e-103 379.4 255 70.6
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 5.7e-101 371.7 317 57.7
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.8e-100 368.6 309 58.3
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.7e-97 360.1 317 54.9
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 7.9e-95 351.3 254 66.5
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 2.2e-84 316.6 220 71.8
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.0e-78 297.7 312 49.4
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 7.5e-77 291.6 198 72.7
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.3e-76 290.8 166 78.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 3.3e-48 196.4 306 39.2
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 8.0e-47 191.8 142 58.5
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 7.5e-45 185.3 115 73.0
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.1e-43 181.4 290 37.9
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.2e-42 177.9 144 66.0
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 2.1e-42 177.2 299 35.5
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.5e-40 170.2 132 67.4
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 2.0e-29 134.0 109 55.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 4.9e-28 129.4 82 69.5
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.0e-25 121.7 108 60.2
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.1e-25 119.4 68 72.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 2.0e-21 107.5 72 70.8
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.0e-17 93.6 133 46.6
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 7.3e-16 89.0 78 64.1
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.2e-13 81.6 69 56.5
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 4.9e-12 76.3 50 74.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.3e-07 61.6 49 57.1
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 9.0e-06 55.5 40 60.0


User provided reference genes

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