Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.0e-154 550.1 282 100.0
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 4.3e-145 518.1 283 93.6
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 4.0e-135 485.0 283 87.3
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 6.5e-125 451.1 283 79.9
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 3.7e-120 435.3 279 78.9
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 7.9e-115 417.5 284 72.5
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 3.9e-114 415.2 274 73.7
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 6.7e-114 414.5 270 77.4
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.0e-113 412.9 278 74.1
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 2.5e-113 412.5 283 76.0
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.5e-113 412.5 282 74.5
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.8e-112 409.1 282 71.6
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 3.7e-112 408.7 278 72.7
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 4.8e-112 408.3 269 75.8
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 8.2e-112 407.5 282 72.3
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.1e-111 407.1 284 70.4
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.2e-110 403.7 282 73.0
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.5e-110 403.3 282 71.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.5e-110 403.3 282 72.3
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.5e-110 403.3 282 72.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.0e-110 402.9 277 72.9
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.0e-110 402.9 277 72.9
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.0e-110 402.9 277 72.2
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.4e-110 402.1 282 71.6
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.4e-110 402.1 282 71.6
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 3.4e-110 402.1 268 75.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.5e-110 401.7 282 71.6
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.9e-110 401.4 282 71.6
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.0e-109 400.6 273 72.2
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.0e-109 400.6 274 74.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.3e-109 400.2 278 74.1
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.7e-109 399.8 268 75.7
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.2e-109 399.4 274 71.9
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.0e-109 398.3 276 73.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.2e-108 395.6 283 71.7
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 7.2e-108 394.4 283 68.9
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.2e-107 393.7 282 71.6
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.7e-107 392.5 259 75.7
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.9e-106 388.7 282 70.9
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.0e-105 386.3 282 70.9
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.0e-105 386.3 282 70.9
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.0e-105 386.3 281 68.7
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 3.7e-104 382.1 352 61.1
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 8.2e-104 380.9 292 67.5
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 4.1e-103 378.6 266 71.8
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.5e-102 376.7 272 71.0
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.0e-102 376.3 272 66.5
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 3.5e-102 375.6 268 70.9
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 5.9e-102 374.8 272 66.5
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 7.7e-102 374.4 268 69.8
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.0e-101 374.0 276 67.0
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.0e-101 374.0 252 74.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.3e-101 373.6 269 69.5
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 2.9e-101 372.5 270 70.0
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 6.5e-101 371.3 276 65.6
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.5e-100 370.2 267 70.8
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.5e-100 369.4 270 68.5
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.2e-100 368.6 267 70.8
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 9.4e-100 367.5 273 68.5
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.2e-99 367.1 266 72.6
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 6.1e-99 364.8 273 68.1
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.1e-99 364.8 282 64.2
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 8.0e-99 364.4 274 67.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.3e-98 362.8 282 65.6
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.5e-97 360.1 287 64.8
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 1.5e-97 360.1 276 68.5
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 2.0e-97 359.8 276 67.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.0e-97 359.8 265 71.3
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 5.7e-97 358.2 276 67.0
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 8.2e-96 354.4 267 67.0
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 8.2e-96 354.4 274 66.1
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.8e-95 353.2 293 68.6
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 4.1e-95 352.1 267 66.7
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 5.3e-95 351.7 290 65.2
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.6e-94 350.1 265 67.5
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.6e-94 350.1 269 66.9
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.6e-94 349.4 293 68.3
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 7.7e-94 347.8 270 66.7
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.0e-93 347.4 278 66.5
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.0e-93 347.4 278 66.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.5e-93 344.7 260 65.0
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 4.2e-92 342.0 259 68.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 9.4e-92 340.9 259 67.2
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.2e-91 340.5 278 65.5
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.1e-91 339.7 278 65.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.3e-88 330.5 275 65.1
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.3e-88 330.5 258 65.5
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 4.0e-82 308.9 276 58.3
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.4e-79 300.4 271 60.5
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.0e-74 282.7 196 72.4
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 2.2e-72 276.6 171 78.4
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.3e-69 266.5 181 73.5
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.9e-68 263.5 179 70.4
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 9.5e-68 261.2 178 74.2
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 9.2e-63 244.6 187 68.4
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.0e-61 239.6 169 71.6
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.2e-59 234.2 286 46.9
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 8.9e-58 228.0 137 77.4
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 5.4e-55 218.8 263 46.4
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 5.4e-55 218.8 282 44.0
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.0e-53 214.5 268 47.8
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.3e-53 213.4 174 65.5
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 5.6e-52 208.8 157 70.1
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.6e-49 199.9 271 44.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.1e-44 184.5 267 42.3
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.2e-43 181.0 231 45.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 7.1e-39 165.2 276 42.0
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 9.0e-34 148.3 134 59.7
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 9.6e-28 128.3 279 32.6
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.1e-27 127.1 78 76.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.7e-24 117.5 92 60.9
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 6.0e-22 109.0 165 41.2
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 5.6e-20 102.4 77 64.9
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.7e-19 99.8 76 63.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-18 96.3 173 39.9
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.9e-16 89.4 65 61.5
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 7.1e-15 85.5 73 58.9
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.3e-13 80.5 130 39.2
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.4e-10 71.2 79 46.8
Manes.02G163600 Manihot esculenta HOM05D006622 ORTHO05D007939 7.2e-07 58.9 44 61.4


User provided reference genes

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