Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.7e-45 185.7 97 100.0
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 3.1e-26 121.7 93 77.4
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 3.4e-25 118.2 87 79.3
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 6.7e-21 104.0 88 65.9
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 6.7e-21 104.0 80 73.8
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 1.9e-20 102.4 88 64.8
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 1.3e-19 99.8 88 63.6
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 2.8e-19 98.6 84 63.1
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 3.7e-19 98.2 75 69.3
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 8.2e-19 97.1 76 71.1
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 4.0e-18 94.7 88 62.5
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 6.9e-18 94.0 81 67.9
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 9.0e-18 93.6 85 68.2
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 9.0e-18 93.6 88 65.9
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 1.5e-17 92.8 84 60.7
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 1.5e-17 92.8 84 63.1
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 4.5e-17 91.3 76 71.1
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 1.1e-15 86.7 82 64.6
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 2.5e-15 85.5 78 59.0
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 3.2e-15 85.1 81 58.0
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 3.2e-15 85.1 77 62.3
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 3.2e-15 85.1 96 51.0
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 4.2e-15 84.7 81 58.0
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 5.5e-15 84.3 79 58.2
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 7.1e-15 84.0 90 55.6
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 9.3e-15 83.6 88 56.8
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 9.3e-15 83.6 88 56.8
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 1.2e-14 83.2 74 67.6
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.2e-14 83.2 80 60.0
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.6e-14 82.8 77 61.0
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.1e-14 82.4 79 59.5
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 2.7e-14 82.0 76 60.5
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 3.5e-14 81.6 88 56.8
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 3.5e-14 81.6 84 57.1
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 3.5e-14 81.6 73 60.3
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 4.6e-14 81.3 82 57.3
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 4.6e-14 81.3 78 56.4
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 6.0e-14 80.9 77 59.7
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 7.9e-14 80.5 80 56.2
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 1.0e-13 80.1 84 56.0
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 1.0e-13 80.1 79 59.5
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 1.3e-13 79.7 77 58.4
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 1.3e-13 79.7 88 54.5
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 2.3e-13 79.0 82 54.9
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 3.9e-13 78.2 82 53.7
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 6.7e-13 77.4 79 60.8
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 6.7e-13 77.4 67 65.7
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 1.5e-12 76.3 79 59.5
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 1.9e-12 75.9 85 52.9
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 2.5e-12 75.5 79 57.0
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 3.3e-12 75.1 84 56.0
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 4.3e-12 74.7 87 52.9
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 5.7e-12 74.3 71 62.0
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 7.4e-12 73.9 79 54.4
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 9.7e-12 73.6 90 52.2
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 2.8e-11 72.0 77 58.4
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 6.3e-11 70.9 88 48.9
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 8.2e-11 70.5 84 51.2
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 1.4e-10 69.7 80 55.0
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 1.4e-10 69.7 80 53.8
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 5.3e-10 67.8 69 62.3
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 6.9e-10 67.4 67 52.2
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 4.5e-09 64.7 72 56.9
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 4.5e-09 64.7 72 56.9
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 4.5e-09 64.7 50 66.0
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 5.9e-09 64.3 47 63.8
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 7.6e-09 63.9 78 50.0
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 2.2e-08 62.4 61 62.3
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 1.4e-07 59.7 58 58.6


User provided reference genes

Program Settings