Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G165100 Populus trichocarpa HOM05D005003 ORTHO05D006220 2.8e-38 161.4 77 100.0
COL.COLO4_16399 Corchorus olitorius HOM05D005003 ORTHO05D006220 7.4e-23 110.2 79 70.9
Dinv44775 Davidia involucrata HOM05D005003 ORTHO05D006220 9.6e-23 109.8 79 69.6
Atru.chr13.1187 Acer truncatum HOM05D005003 ORTHO05D006220 1.3e-22 109.4 79 70.9
Gohir.A06G035800 Gossypium hirsutum HOM05D005003 ORTHO05D006220 1.6e-22 109.0 79 69.6
Gohir.D06G036300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 1.6e-22 109.0 79 69.6
Gorai.010G040300 Gossypium raimondii HOM05D005003 ORTHO05D006220 1.6e-22 109.0 79 69.6
Sabra02G0076000 Salix brachista HOM05D005003 ORTHO05D006220 1.6e-22 109.0 79 68.4
Thecc.08G106800 Theobroma cacao HOM05D005003 ORTHO05D006220 1.6e-22 109.0 79 69.6
CANSAT25G3351 Cannabis sativa HOM05D005003 ORTHO05D006220 4.8e-22 107.5 79 68.4
Migut.C00095 Erythranthe guttata HOM05D005003 ORTHO05D006220 4.8e-22 107.5 79 69.6
Oeu046301.1 Olea europaea HOM05D005003 ORTHO05D006220 4.8e-22 107.5 79 69.6
MBI05_g37053_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 6.3e-22 107.1 79 69.6
Potri.002G096500 Populus trichocarpa HOM05D005003 ORTHO05D006220 6.3e-22 107.1 79 68.4
TWI56G0498 Tripterygium wilfordii HOM05D005003 ORTHO05D006220 6.3e-22 107.1 78 69.2
Cfa013635 Carpinus fangiana HOM05D005003 ORTHO05D006220 8.2e-22 106.7 79 69.6
Manes.18G067500 Manihot esculenta HOM05D005003 ORTHO05D006220 8.2e-22 106.7 79 68.4
Ca_02288_v3 Cicer arietinum L. HOM05D005003 ORTHO05D006220 1.1e-21 106.3 79 68.4
Lj6g0010535 Lotus japonicus HOM05D005003 ORTHO05D006220 1.1e-21 106.3 79 68.4
Phvul.009G222900 Phaseolus vulgaris HOM05D005003 ORTHO05D006220 1.4e-21 105.9 79 68.4
Haze_22267 Corylus avellana HOM05D005003 ORTHO05D006220 1.8e-21 105.5 77 68.8
Medtr2g044600 Medicago truncatula HOM05D005003 ORTHO05D006220 1.8e-21 105.5 79 67.1
Rhsim06G0082100 Rhododendron simsii HOM05D005003 ORTHO05D006220 1.8e-21 105.5 79 68.4
FAN13G0908 Fragaria x ananassa HOM05D005003 ORTHO05D006220 2.4e-21 105.1 80 71.2
Manes.02G152700 Manihot esculenta HOM05D005003 ORTHO05D006220 2.4e-21 105.1 79 68.4
Sc01g0000450 Simmondsia chinensis HOM05D005003 ORTHO05D006220 2.4e-21 105.1 79 65.8
Psat1g137840 Pisum sativum HOM05D005003 ORTHO05D006220 3.1e-21 104.8 79 67.1
Nitab4.5_0005777g0050 Nicotiana tabacum HOM05D005003 ORTHO05D006220 4.1e-21 104.4 77 67.5
GSVIVG01009030001 Vitis vinifera HOM05D005003 ORTHO05D006220 4.1e-21 104.4 79 68.4
Ah.05g169960 Amaranthus hybridus HOM05D005003 ORTHO05D006220 5.3e-21 104.0 80 70.0
Cc10_g07200 Coffea canephora HOM05D005003 ORTHO05D006220 6.9e-21 103.6 79 65.8
Eucgr.B00022 Eucalyptus grandis HOM05D005003 ORTHO05D006220 6.9e-21 103.6 79 67.1
Glyma.15G183500 Glycine max HOM05D005003 ORTHO05D006220 6.9e-21 103.6 79 67.1
FAN08G0347 Fragaria x ananassa HOM05D005003 ORTHO05D006220 9.0e-21 103.2 80 70.0
Nitab4.5_0000232g0240 Nicotiana tabacum HOM05D005003 ORTHO05D006220 9.0e-21 103.2 77 66.2
VMungo1309G2656 Vigna mungo HOM05D005003 ORTHO05D006220 9.0e-21 103.2 79 65.8
arahy.Tifrunner.gnm1.ann1.T3BG7X Arachis hypogaea HOM05D005003 ORTHO05D006220 1.2e-20 102.8 79 65.8
Lj4A723T22 Lonicera japonica HOM05D005003 ORTHO05D006220 1.2e-20 102.8 79 65.8
TPR.G20790 Trifolium pratense HOM05D005003 ORTHO05D006220 1.2e-20 102.8 79 65.8
Actinidia10323 Actinidia chinensis HOM05D005003 ORTHO05D006220 1.5e-20 102.4 79 64.6
EL10Ac1g01213 Beta vulgaris HOM05D005003 ORTHO05D006220 1.5e-20 102.4 80 67.5
Cpa.g.sc36.131 Carica papaya HOM05D005003 ORTHO05D006220 1.5e-20 102.4 79 68.4
FvH4_5g37331 Fragaria vesca HOM05D005003 ORTHO05D006220 1.5e-20 102.4 80 68.8
FAN18G2350 Fragaria x ananassa HOM05D005003 ORTHO05D006220 1.5e-20 102.4 80 68.8
Hma1.2p1_0575F.1_g181570 Hydrangea macrophylla HOM05D005003 ORTHO05D006220 1.5e-20 102.4 79 64.6
QL12p036782 Quercus lobata HOM05D005003 ORTHO05D006220 1.5e-20 102.4 79 64.6
Ciclev10003185m.g Citrus clementina HOM05D005003 ORTHO05D006220 2.0e-20 102.1 79 65.8
MD08G1182800 Malus domestica HOM05D005003 ORTHO05D006220 2.0e-20 102.1 78 66.7
Gohir.A05G226300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 2.6e-20 101.7 79 60.8
Peaxi162Scf00041g01737 Petunia axillaris HOM05D005003 ORTHO05D006220 2.6e-20 101.7 79 63.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 2.6e-20 101.7 79 65.8
Lalb_Chr08g0232881 Lupinus albus HOM05D005003 ORTHO05D006220 3.4e-20 101.3 79 64.6
SGA_v2.0_scaffold729G53525 Striga asiatica HOM05D005003 ORTHO05D006220 3.4e-20 101.3 79 64.6
Aqoxy6G00783 Aquilegia oxysepala HOM05D005003 ORTHO05D006220 4.5e-20 100.9 79 64.6
Nn1g05355 Nelumbo nucifera HOM05D005003 ORTHO05D006220 4.5e-20 100.9 79 65.8
SalBow7G4179 Salvia bowleyana HOM05D005003 ORTHO05D006220 4.5e-20 100.9 79 64.6
CSS0024644 Camellia sinensis var. sinensis HOM05D005003 ORTHO05D006220 5.9e-20 100.5 79 65.8
THA.LOC104816746 Tarenaya hassleriana HOM05D005003 ORTHO05D006220 5.9e-20 100.5 79 65.8
arahy.Tifrunner.gnm1.ann1.DW6FDI Arachis hypogaea HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 64.6
Gorai.009G237000 Gossypium raimondii HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 59.5
Lalb_Chr11g0073941 Lupinus albus HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 62.0
PSO210G4886 Papaver somniferum HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 63.3
PSO447G0231 Papaver somniferum HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 63.3
Solyc04g074140.4 Solanum lycopersicum HOM05D005003 ORTHO05D006220 7.6e-20 100.1 77 64.9
Sopen04g029320 Solanum pennellii HOM05D005003 ORTHO05D006220 7.6e-20 100.1 77 64.9
TAR625G1506 Trochodendron aralioides HOM05D005003 ORTHO05D006220 7.6e-20 100.1 79 65.8
PGR044G0640 Punica granatum HOM05D005003 ORTHO05D006220 1.0e-19 99.8 79 63.3
Zm00001eb006880 Zea mays HOM05D005003 ORTHO05D006220 1.0e-19 99.8 76 68.4
AUR62027758 Chenopodium quinoa HOM05D005003 ORTHO05D006220 1.3e-19 99.4 80 67.5
AUR62038523 Chenopodium quinoa HOM05D005003 ORTHO05D006220 1.3e-19 99.4 80 67.5
Nn5g30108 Nelumbo nucifera HOM05D005003 ORTHO05D006220 1.3e-19 99.4 79 65.8
Aa31LG6G8500 Aethionema arabicum HOM05D005003 ORTHO05D006220 1.7e-19 99.0 79 64.6
Gohir.D05G229033 Gossypium hirsutum HOM05D005003 ORTHO05D006220 2.2e-19 98.6 79 59.5
MBI02_g35765_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 2.2e-19 98.6 79 62.0
ECA246G4896 Erigeron canadensis HOM05D005003 ORTHO05D006220 3.8e-19 97.8 79 63.3
CAN.G101.26 Capsicum annuum HOM05D005003 ORTHO05D006220 5.0e-19 97.4 79 59.5
HanXRQChr11g0327771 Helianthus annuus HOM05D005003 ORTHO05D006220 5.0e-19 97.4 79 63.3
PGSC0003DMG400006406 Solanum tuberosum HOM05D005003 ORTHO05D006220 5.0e-19 97.4 77 63.6
MSTRG.24973 Avicennia marina HOM05D005003 ORTHO05D006220 8.5e-19 96.7 79 63.3
ATR0782G104 Amborella trichopoda HOM05D005003 ORTHO05D006220 1.1e-18 96.3 79 59.5
Duzib116G0723 Durio zibethinus HOM05D005003 ORTHO05D006220 1.9e-18 95.5 79 60.8
FAN04G0108 Fragaria x ananassa HOM05D005003 ORTHO05D006220 1.9e-18 95.5 80 65.0
BcaC05g27758 Brassica carinata HOM05D005003 ORTHO05D006220 2.5e-18 95.1 78 64.1
C05p37520 Brassica napus HOM05D005003 ORTHO05D006220 2.5e-18 95.1 78 64.1
Lj4A102G54 Lonicera japonica HOM05D005003 ORTHO05D006220 3.2e-18 94.7 79 60.8
A05p23910 Brassica napus HOM05D005003 ORTHO05D006220 5.5e-18 94.0 78 62.8
BolC5t32493H Brassica oleracea HOM05D005003 ORTHO05D006220 5.5e-18 94.0 78 62.8
BraA05t21269Z Brassica rapa HOM05D005003 ORTHO05D006220 5.5e-18 94.0 78 62.8
Lsat_1_v5_gn_6_103020 Lactuca sativa HOM05D005003 ORTHO05D006220 5.5e-18 94.0 79 59.5
AL1G49100 Arabidopsis lyrata HOM05D005003 ORTHO05D006220 7.2e-18 93.6 78 61.5
Carub.0001s3263 Capsella rubella HOM05D005003 ORTHO05D006220 7.2e-18 93.6 78 61.5
CARHR033930 Cardamine hirsuta HOM05D005003 ORTHO05D006220 7.2e-18 93.6 78 61.5
Thhalv10001817m.g Eutrema salsugineum HOM05D005003 ORTHO05D006220 7.2e-18 93.6 79 60.8
Gohir.A02G076300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 9.3e-18 93.2 79 60.8
DCAR_008735 Daucus carota HOM05D005003 ORTHO05D006220 1.6e-17 92.4 80 62.5
RcHm_v2.0_Chr7g0238981 Rosa chinensis HOM05D005003 ORTHO05D006220 1.6e-17 92.4 67 68.7
Sp1g29750 Schrenkiella parvula HOM05D005003 ORTHO05D006220 1.6e-17 92.4 78 59.0
AT1G34630 Arabidopsis thaliana HOM05D005003 ORTHO05D006220 2.1e-17 92.0 78 60.3
BcaB03g13676 Brassica carinata HOM05D005003 ORTHO05D006220 2.1e-17 92.0 78 61.5
Gorai.005G094100 Gossypium raimondii HOM05D005003 ORTHO05D006220 2.1e-17 92.0 79 59.5
Os03g0190900 Oryza sativa ssp. japonica HOM05D005003 ORTHO05D006220 3.6e-17 91.3 76 63.2
Hund26962 Selenicereus undatus HOM05D005003 ORTHO05D006220 4.6e-17 90.9 80 62.5
Gohir.D02G083500 Gossypium hirsutum HOM05D005003 ORTHO05D006220 6.1e-17 90.5 79 58.2
CsaV3_2G029670 Cucumis sativus L. HOM05D005003 ORTHO05D006220 1.0e-16 89.7 79 59.5
BcaB07g33109 Brassica carinata HOM05D005003 ORTHO05D006220 3.0e-16 88.2 78 57.7
Sed0012063 Sechium edule HOM05D005003 ORTHO05D006220 3.0e-16 88.2 79 58.2
BcaC08g43771 Brassica carinata HOM05D005003 ORTHO05D006220 5.1e-16 87.4 79 58.2
A09p32030 Brassica napus HOM05D005003 ORTHO05D006220 5.1e-16 87.4 79 58.2
C06p11460 Brassica napus HOM05D005003 ORTHO05D006220 5.1e-16 87.4 79 58.2
BolC6t36281H Brassica oleracea HOM05D005003 ORTHO05D006220 5.1e-16 87.4 79 58.2
BraA09t38740Z Brassica rapa HOM05D005003 ORTHO05D006220 5.1e-16 87.4 79 58.2
HPP92_027712 Vanilla planifolia HOM05D005003 ORTHO05D006220 5.1e-16 87.4 76 57.9
Hund16905 Selenicereus undatus HOM05D005003 ORTHO05D006220 5.7e-15 84.0 70 65.7
CDE03G0282 Ceratophyllum demersum HOM05D005003 ORTHO05D006220 7.4e-15 83.6 79 58.2
unitig_37.g12958 Utricularia gibba HOM05D005003 ORTHO05D006220 7.4e-15 83.6 79 55.7
SEGI_39253 Sequoiadendron giganteum HOM05D005003 ORTHO05D006220 9.7e-15 83.2 77 53.2
unitig_37.g12957 Utricularia gibba HOM05D005003 ORTHO05D006220 1.2e-12 76.3 64 59.4
Oeu012928.1 Olea europaea HOM05D005003 ORTHO05D006220 5.9e-12 73.9 69 56.5
ClCG08G011090 Citrullus lanatus HOM05D005003 ORTHO05D006220 1.0e-11 73.2 49 71.4
Pp3c21_12240 Physcomitrium patens HOM05D005003 ORTHO05D006220 2.3e-08 62.0 80 46.2
MD15G1369200 Malus domestica HOM05D005003 ORTHO05D006220 3.9e-08 61.2 51 64.7
SMO367G0178 Selaginella moellendorffii HOM05D005003 ORTHO05D006220 3.9e-08 61.2 78 47.4
CDE06G0352 Ceratophyllum demersum HOM05D005003 ORTHO05D006220 1.5e-07 59.3 49 61.2
Mapoly0082s0089 Marchantia polymorpha HOM05D005003 ORTHO05D006220 2.6e-07 58.5 90 41.1


User provided reference genes

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