Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.8e-128 462.6 237 100.0
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 9.9e-119 430.3 232 94.4
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.9e-102 375.6 237 79.3
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 7.1e-101 370.9 237 79.3
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 1.6e-100 369.8 236 76.7
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 5.1e-99 364.8 232 76.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 6.7e-99 364.4 237 76.4
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 8.7e-99 364.0 232 75.9
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 8.2e-97 357.5 213 82.2
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.1e-96 357.1 240 72.9
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.1e-96 357.1 237 75.9
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.1e-96 357.1 237 75.9
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 3.1e-96 355.5 230 75.7
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.2e-95 353.6 254 69.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.5e-95 353.2 235 72.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.5e-95 353.2 226 75.7
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.6e-95 352.4 235 72.8
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.5e-95 351.7 237 73.4
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 4.5e-95 351.7 237 72.2
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 3.8e-94 348.6 235 72.3
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 5.0e-94 348.2 232 71.6
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 8.5e-94 347.4 233 73.4
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 8.5e-94 347.4 237 73.0
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.2e-92 343.6 232 72.4
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.6e-92 342.0 232 70.3
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 4.6e-92 341.7 236 68.2
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 6.1e-92 341.3 224 74.1
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 6.1e-92 341.3 232 69.8
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 3.0e-91 339.0 230 71.7
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.0e-91 339.0 232 69.4
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 3.9e-91 338.6 236 68.2
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.9e-91 338.6 230 72.6
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 5.1e-91 338.2 224 74.1
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 5.1e-91 338.2 224 73.2
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 5.1e-91 338.2 222 76.1
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 6.7e-91 337.8 230 72.6
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.1e-90 337.0 227 73.6
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 2.0e-90 336.3 235 69.8
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 4.3e-90 335.1 233 70.4
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 5.7e-90 334.7 232 69.4
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.7e-90 334.0 232 69.0
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 1.7e-89 333.2 237 67.9
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.7e-89 333.2 229 73.8
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 6.3e-89 331.3 227 71.4
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.4e-88 330.1 237 70.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 2.4e-88 329.3 232 68.5
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 9.1e-88 327.4 237 69.6
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 9.1e-88 327.4 233 69.5
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.5e-87 326.6 226 70.4
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 4.5e-87 325.1 234 68.8
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 5.9e-87 324.7 232 69.8
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 5.9e-87 324.7 237 66.7
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 7.7e-87 324.3 226 71.7
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 7.7e-87 324.3 230 70.0
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.0e-86 323.9 212 72.2
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.7e-86 323.2 227 70.5
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 3.8e-86 322.0 229 69.9
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 5.0e-86 321.6 214 72.9
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.4e-85 320.1 223 70.0
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.9e-85 319.7 232 65.5
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.9e-85 319.7 234 67.5
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 7.2e-85 317.8 234 67.9
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.2e-84 317.0 227 70.0
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 6.1e-84 314.7 233 67.4
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 3.0e-83 312.4 231 66.7
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 3.0e-83 312.4 232 66.4
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 8.8e-83 310.8 236 64.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 8.8e-83 310.8 231 66.7
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 1.1e-82 310.5 237 64.1
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 5.7e-82 308.1 231 64.9
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 5.7e-82 308.1 233 65.2
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 1.7e-81 306.6 229 64.2
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 6.3e-81 304.7 234 65.0
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 8.2e-81 304.3 237 62.4
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.4e-80 303.5 231 65.4
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.4e-80 303.5 231 65.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 1.4e-80 303.5 231 64.9
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.8e-80 303.1 232 65.1
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 9.1e-80 300.8 226 66.8
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 2.6e-79 299.3 235 60.4
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 3.5e-79 298.9 228 64.9
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 3.5e-79 298.9 232 63.4
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 4.5e-79 298.5 229 62.4
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.5e-77 293.5 214 65.9
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 9.4e-77 290.8 237 61.6
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.6e-76 290.0 229 65.5
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.1e-76 289.7 222 64.0
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 4.7e-76 288.5 217 66.8
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.4e-75 287.0 234 59.4
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.4e-75 287.0 224 60.7
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 5.2e-75 285.0 208 66.3
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 2.9e-70 269.2 217 59.0
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.2e-69 265.4 224 60.3
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 4.1e-64 248.8 255 50.6
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 7.7e-63 244.6 159 73.6
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 2.5e-61 239.6 224 54.0
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 9.4e-61 237.7 152 79.6
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.2e-60 237.3 234 55.6
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.8e-51 206.8 149 68.5
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.5e-47 192.2 210 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.3e-46 190.7 226 46.0
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 6.6e-46 188.3 134 63.4
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.5e-45 187.2 229 43.2
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.3e-45 186.0 230 47.0
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.1e-44 183.3 159 58.5
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 9.8e-42 174.5 218 42.7
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 8.3e-41 171.4 217 41.5
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 7.3e-37 158.3 119 66.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 5.2e-35 152.1 219 37.4
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 9.8e-34 147.9 166 47.6
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.2e-32 141.4 97 69.1
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 4.7e-28 129.0 109 57.8
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.4e-24 116.7 93 60.2
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 2.8e-20 103.2 204 33.8
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 5.6e-13 79.0 91 49.5
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 5.6e-13 79.0 91 49.5
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 7.6e-10 68.6 39 76.9
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 4.9e-09 65.9 41 70.7


User provided reference genes

Program Settings