Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 2.1e-123 445.7 221 100.0
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 4.8e-75 285.0 168 85.7
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 2.1e-62 243.0 217 58.5
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 9.1e-58 227.6 224 50.4
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 2.7e-57 226.1 210 54.8
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 7.7e-57 224.6 203 53.7
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 7.7e-57 224.6 203 53.2
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 2.2e-56 223.0 226 53.1
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 6.5e-56 221.5 213 54.0
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 1.9e-55 219.9 221 52.9
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 2.7e-54 216.1 229 52.8
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 4.7e-54 215.3 219 53.4
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 2.0e-52 209.9 223 48.9
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 4.8e-51 205.3 221 51.6
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 3.5e-49 199.1 217 48.8
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 3.5e-49 199.1 216 48.6
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.7e-48 196.8 217 48.4
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 8.5e-48 194.5 159 59.1
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.9e-47 193.4 224 46.9
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 2.5e-47 193.0 220 45.9
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 4.2e-47 192.2 217 48.4
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 2.1e-46 189.9 221 44.8
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 2.1e-46 189.9 216 46.3
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 2.1e-46 189.9 223 46.2
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 3.6e-46 189.1 211 45.0
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 6.1e-46 188.3 212 46.2
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 8.0e-46 188.0 218 44.0
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 1.8e-45 186.8 221 44.3
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 2.3e-45 186.4 222 44.1
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 3.0e-45 186.0 224 46.4
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 6.8e-45 184.9 221 46.2
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 4.4e-44 182.2 203 48.3
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 7.5e-44 181.4 201 46.8
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 1.7e-43 180.3 219 45.2
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 4.9e-43 178.7 168 51.8
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 6.3e-43 178.3 225 44.0
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 3.1e-42 176.0 236 45.8
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 3.1e-42 176.0 211 46.9
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 4.1e-42 175.6 230 43.0
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 5.4e-42 175.3 221 44.8
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 1.2e-41 174.1 206 47.6
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 1.2e-41 174.1 223 43.0
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 6.6e-40 168.3 211 41.7
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 8.6e-40 167.9 225 42.2
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 2.5e-39 166.4 211 46.4
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 9.5e-39 164.5 224 41.5
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 3.6e-38 162.5 208 43.8
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 4.7e-38 162.2 200 44.0
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 6.1e-38 161.8 210 44.3
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.0e-37 161.0 209 43.1
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 5.2e-37 158.7 210 42.9
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 6.8e-37 158.3 210 43.8
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 1.2e-36 157.5 221 42.5
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 1.2e-36 157.5 218 43.6
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 3.4e-36 156.0 224 41.1
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 9.8e-36 154.5 150 51.3
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 4.9e-35 152.1 210 42.4
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.4e-34 149.8 212 43.9
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 5.4e-34 148.7 162 48.8
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 9.2e-34 147.9 157 48.4
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 5.6e-31 138.7 210 40.5
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 5.2e-29 132.1 118 54.2
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 2.6e-28 129.8 164 40.9
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 9.8e-28 127.9 150 46.0
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 4.1e-26 122.5 168 42.3
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 2.7e-25 119.8 142 43.7
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 7.3e-23 111.7 221 35.7
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 9.5e-23 111.3 180 36.1
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 1.8e-21 107.1 120 42.5
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 2.3e-16 90.1 82 52.4
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 5.1e-16 89.0 161 36.0
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 3.6e-14 82.8 110 36.4
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 6.8e-13 78.6 163 29.4
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 5.8e-12 75.5 187 28.9
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.9e-10 70.5 156 30.8
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 2.4e-10 70.1 206 26.7
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 3.2e-10 69.7 168 29.2
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 4.1e-10 69.3 156 30.1
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 4.1e-10 69.3 156 30.1
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 5.4e-10 68.9 186 27.4
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 9.2e-10 68.2 169 27.8
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 3.5e-09 66.2 155 29.7
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 1.0e-08 64.7 172 25.6
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.3e-08 64.3 172 25.0
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 1.3e-08 64.3 160 25.6
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 1.7e-08 63.9 167 27.5
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.0e-08 63.2 193 26.4
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 5.1e-08 62.4 164 24.4
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 2.5e-07 60.1 164 25.6
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 2.5e-07 60.1 148 27.0
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 1.6e-06 57.4 104 36.5
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 2.8e-06 56.6 183 24.6


User provided reference genes

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