Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 0.0e+00 1369.8 706 100.0
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 0.0e+00 1270.4 708 93.2
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 0.0e+00 1089.7 720 78.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 6.7e-296 1020.4 721 74.8
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 5.9e-292 1007.3 737 73.4
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 6.5e-291 1003.8 716 75.3
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 3.6e-289 998.0 708 75.3
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 6.3e-286 987.3 712 73.6
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 9.1e-285 983.4 727 73.2
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.0e-283 979.9 723 72.9
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 1.0e-283 979.9 731 72.0
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 3.2e-282 974.9 715 73.1
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.6e-281 972.6 715 73.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.7e-281 971.1 707 74.0
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 6.1e-281 970.7 719 70.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.3e-280 968.8 727 72.4
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.9e-280 968.0 719 71.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 6.7e-280 967.2 716 73.0
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.8e-278 961.1 707 72.8
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 6.3e-278 960.7 727 72.4
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.3e-277 957.6 721 71.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 5.9e-276 954.1 719 69.5
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 7.7e-276 953.7 719 69.5
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 3.8e-275 951.4 719 69.1
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.1e-274 949.9 725 70.2
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.9e-274 949.1 717 69.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.2e-274 948.3 718 70.1
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.2e-274 947.2 717 71.5
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 9.4e-274 946.8 717 71.7
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 2.1e-273 945.7 728 70.3
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.1e-273 945.7 717 71.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.1e-273 945.7 717 71.1
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 8.0e-273 943.7 719 70.0
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.0e-272 943.3 717 70.7
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.8e-272 942.6 717 69.6
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 4.4e-271 937.9 728 69.9
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.4e-271 937.2 726 70.4
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 4.8e-270 934.5 732 69.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.7e-267 926.0 721 69.2
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 2.9e-267 925.2 726 68.2
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 8.8e-264 913.7 722 69.3
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 9.7e-263 910.2 736 68.5
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 8.3e-262 907.1 733 68.1
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.1e-261 905.2 707 69.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.1e-261 903.7 707 69.2
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.2e-259 899.0 707 69.0
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 2.2e-259 899.0 727 68.1
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.3e-256 889.0 799 61.3
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 6.8e-256 887.5 726 66.9
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 6.8e-256 887.5 710 68.2
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 6.8e-256 887.5 717 68.2
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.8e-254 882.1 721 66.6
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.1e-253 878.6 723 66.9
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 7.0e-253 877.5 639 71.5
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 7.0e-253 877.5 941 55.3
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 6.6e-251 870.9 711 67.8
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 2.5e-250 869.0 724 65.7
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.9e-246 854.7 718 65.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 5.4e-245 851.3 709 65.3
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.0e-244 849.4 731 63.6
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 8.6e-243 844.0 593 75.9
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 5.6e-242 841.3 724 64.0
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 3.6e-241 838.6 928 54.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 2.6e-239 832.4 719 64.3
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 4.4e-239 831.6 724 63.5
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.7e-238 829.7 716 63.3
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.2e-238 829.3 728 63.2
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 2.9e-238 828.9 756 62.4
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 2.7e-236 822.4 721 63.7
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 1.5e-234 816.6 721 63.7
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 2.5e-234 815.8 717 63.7
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 2.1e-233 812.8 710 63.8
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.4e-232 810.1 707 64.5
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 2.3e-232 809.3 727 61.9
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 4.9e-230 801.6 705 63.3
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.9e-229 799.7 714 62.6
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.2e-229 798.9 728 61.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 6.6e-227 791.2 718 60.7
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 3.1e-224 782.3 763 58.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 3.1e-224 782.3 705 61.8
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.2e-224 781.6 714 60.4
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.2e-221 772.3 718 59.5
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-219 766.9 733 60.2
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.6e-217 760.0 720 59.9
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 5.2e-216 755.0 714 59.1
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 5.8e-215 751.5 714 59.0
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 4.9e-214 748.4 715 58.9
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 8.4e-214 747.7 714 58.7
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.1e-213 747.3 720 58.5
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.9e-213 746.5 588 67.9
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.7e-211 740.0 725 58.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.9e-210 736.5 738 56.9
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 9.6e-210 734.2 714 58.3
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 4.0e-208 728.8 552 71.4
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.5e-207 726.9 747 57.0
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 7.6e-207 724.5 731 55.8
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.9e-205 719.9 616 63.1
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.3e-201 707.2 613 62.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 4.8e-201 705.3 734 54.6
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.8e-198 695.7 575 66.4
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 9.6e-194 681.0 717 56.1
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.8e-192 676.8 535 66.4
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 7.6e-183 644.8 586 61.6
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.1e-168 597.8 586 57.7
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.0e-155 553.1 511 59.5
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 4.0e-139 499.6 768 42.4
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.4e-131 474.6 789 39.7
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 2.6e-122 443.7 466 58.2
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.4e-112 411.4 706 38.1
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 2.2e-105 387.5 298 69.8
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.7e-100 369.8 271 71.2
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.6e-90 337.4 449 47.9
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 5.3e-75 286.6 421 44.2
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.1e-72 278.9 311 53.7
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.1e-63 248.1 192 67.7
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 4.6e-63 246.9 368 44.8
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.6e-58 231.1 182 65.9
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.3e-53 214.2 288 47.2
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 3.0e-46 191.0 156 61.5
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 8.8e-46 189.5 154 66.9
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 5.5e-40 170.2 144 63.9
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.3e-38 164.9 107 83.2
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.1e-37 162.5 133 67.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-37 162.5 97 84.5
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 2.6e-37 161.4 128 68.8
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 6.5e-33 146.7 127 61.4
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.7e-28 132.1 156 50.0
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 4.1e-27 127.5 115 59.1
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 1.2e-10 72.8 132 40.2
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 6.6e-09 67.0 121 37.2
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.1e-06 58.2 35 80.0
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 6.8e-06 57.0 186 29.0


User provided reference genes

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