Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 0.0e+00 1368.2 680 100.0
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 0.0e+00 1198.3 669 90.0
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.0e-200 704.1 686 58.6
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 1.2e-185 654.1 705 50.2
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 5.6e-183 645.2 691 52.4
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 5.8e-180 635.2 714 50.3
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 2.9e-171 606.3 685 49.5
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 2.5e-170 603.2 694 48.0
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 1.3e-168 597.4 690 50.3
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.0e-168 596.3 616 51.5
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.1e-168 595.5 689 49.3
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 5.7e-167 592.0 690 50.3
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 3.1e-165 586.3 683 49.0
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.1e-165 586.3 681 49.3
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.6e-164 583.2 722 47.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 2.9e-163 579.7 702 48.3
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.9e-163 579.7 680 49.6
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 7.2e-162 575.1 722 46.4
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 7.4e-159 565.1 695 46.8
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 2.8e-158 563.1 694 47.0
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 2.8e-158 563.1 711 47.7
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 6.9e-157 558.5 696 48.1
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.1e-154 551.2 684 47.4
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.2e-154 549.3 683 48.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.2e-153 547.7 690 47.1
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 1.6e-153 547.4 683 47.6
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.6e-153 546.2 683 47.4
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 2.2e-150 537.0 618 47.7
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 3.7e-150 536.2 684 45.5
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 1.0e-147 528.1 685 45.5
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.3e-147 527.7 688 43.8
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 2.5e-146 523.5 697 44.0
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 2.7e-145 520.0 691 41.1
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 2.3e-144 516.9 687 43.5
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 3.0e-144 516.5 689 42.8
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.7e-142 510.8 701 43.4
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 4.8e-142 509.2 696 42.7
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 5.2e-136 489.2 649 43.6
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.2e-134 483.8 691 41.2
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 8.2e-134 481.9 684 44.2
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 1.7e-131 474.2 576 47.0
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 3.2e-130 469.9 657 43.2
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.3e-128 463.8 681 41.9
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 1.5e-127 461.1 698 39.7
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 2.8e-126 456.8 692 41.6
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 3.7e-126 456.4 674 42.7
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 8.3e-126 455.3 679 39.5
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 9.1e-125 451.8 661 40.7
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 2.7e-124 450.3 687 39.6
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 3.5e-124 449.9 548 49.5
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 8.6e-123 445.3 695 40.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 1.5e-122 444.5 668 40.6
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 3.3e-122 443.4 697 40.6
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.6e-121 441.0 669 40.1
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 3.6e-121 439.9 698 39.3
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 2.3e-120 437.2 717 39.7
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.2e-119 434.9 694 39.5
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 2.6e-119 433.7 686 38.9
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 2.6e-119 433.7 688 39.2
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 4.4e-119 433.0 561 45.5
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 5.7e-119 432.6 576 43.6
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.7e-118 429.9 700 39.6
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 1.4e-117 427.9 682 40.2
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 2.7e-116 423.7 602 41.9
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.0e-115 421.8 666 39.3
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.3e-115 420.6 656 40.1
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 2.3e-115 420.6 680 37.9
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 6.6e-115 419.1 639 41.6
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.5e-114 415.2 690 38.1
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 3.6e-113 413.3 689 37.3
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 6.1e-113 412.5 663 38.9
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 1.0e-112 411.8 672 38.7
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 1.8e-112 411.0 601 42.4
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 3.0e-112 410.2 673 38.8
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 8.3e-110 402.1 682 37.7
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 5.4e-109 399.4 674 38.1
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 3.3e-106 390.2 679 38.0
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 4.0e-104 383.3 584 39.6
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 2.6e-103 380.6 594 40.6
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 4.1e-101 373.2 711 37.0
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 4.1e-101 373.2 739 36.1
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 1.3e-99 368.2 511 43.4
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 4.4e-95 353.2 714 34.9
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 5.8e-95 352.8 433 46.0
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 2.9e-94 350.5 576 38.2
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.3e-91 341.7 621 37.7
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 5.1e-91 339.7 680 35.3
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 2.6e-87 327.4 690 32.6
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 7.8e-84 315.8 436 42.9
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.5e-82 311.6 695 33.1
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 8.1e-81 305.8 434 41.9
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 1.1e-77 295.4 368 45.7
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.1e-77 295.4 676 32.8
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 1.4e-77 295.0 429 40.8
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 1.9e-77 294.7 725 33.1
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 3.0e-75 287.3 703 32.7
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 3.9e-75 287.0 703 32.7
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 4.5e-63 246.9 324 44.1
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 6.4e-62 243.0 384 40.6
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.1e-56 225.7 331 43.8
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.2e-46 191.4 194 55.7
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.4e-43 182.2 369 35.2
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.1e-29 136.0 142 50.0
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.1e-29 136.0 192 41.1
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.4e-24 119.0 143 44.8
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 5.2e-19 100.5 95 56.8
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.0e-18 98.6 204 34.3
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 1.4e-16 92.4 483 26.5
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.1e-16 90.9 69 62.3
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.1e-16 90.9 69 62.3
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 7.0e-16 90.1 365 25.5
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.8e-11 75.5 54 63.0
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 5.2e-11 73.9 668 21.3
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 1.3e-09 69.3 310 27.7
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 9.1e-08 63.2 51 54.9
SEGI_32623 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 9.1e-08 63.2 266 24.4
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 2.0e-07 62.0 352 23.6
AagrBONN_evm.TU.Sc2ySwM_117.3678 Anthoceros agrestis HOM05D039764 ORTHO05D031174 1.3e-06 59.3 379 24.8
arahy.Tifrunner.gnm1.ann1.6LA5S9 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.7e-06 58.9 41 68.3
arahy.Tifrunner.gnm1.ann1.G2N9P3 Arachis hypogaea HOM05D000296 ORTHO05D008244 2.3e-06 58.5 41 68.3


User provided reference genes

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