Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 5.7e-59 230.7 117 100.0
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 1.6e-40 169.5 102 83.3
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 4.3e-30 134.8 102 69.6
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 1.4e-20 103.2 109 51.4
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 4.9e-18 94.7 106 51.9
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 1.1e-17 93.6 104 52.9
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 2.7e-16 89.0 105 45.7
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 6.0e-16 87.8 106 50.0
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 1.1e-14 83.6 110 45.5
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 1.2e-13 80.1 106 39.6
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 2.1e-13 79.3 108 48.1
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 8.1e-13 77.4 113 44.2
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 8.1e-13 77.4 108 40.7
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 4.0e-12 75.1 108 46.3
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 2.0e-11 72.8 111 41.4
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 3.4e-11 72.0 112 42.9
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 3.4e-11 72.0 105 41.9
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 5.8e-11 71.2 111 41.4
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 7.5e-11 70.9 112 40.2
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 1.7e-10 69.7 112 40.2
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.7e-10 69.7 112 39.3
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 1.7e-10 69.7 108 41.7
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 1.7e-10 69.7 107 40.2
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 2.2e-10 69.3 111 40.5
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 2.2e-10 69.3 105 38.1
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 4.9e-10 68.2 109 39.4
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 1.1e-09 67.0 99 40.4
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 1.1e-09 67.0 98 40.8
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 2.4e-09 65.9 103 35.9
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 3.2e-09 65.5 112 35.7
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 4.1e-09 65.1 83 41.0
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 7.1e-09 64.3 105 39.0
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 1.6e-08 63.2 107 37.4
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 2.1e-08 62.8 101 37.6
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 2.1e-08 62.8 110 34.5
Gohir.A11G045200 Gossypium hirsutum HOM05D008334 ORTHO05D010366 3.5e-08 62.0 108 35.2
Gohir.D11G048700 Gossypium hirsutum HOM05D008334 ORTHO05D010366 3.5e-08 62.0 108 35.2
Gorai.007G052300 Gossypium raimondii HOM05D008334 ORTHO05D010366 3.5e-08 62.0 108 35.2
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 7.8e-08 60.8 104 37.5
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 1.0e-07 60.5 110 38.2
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 1.7e-07 59.7 109 35.8
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 1.7e-07 59.7 103 38.8
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 1.7e-07 59.7 93 36.6
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 1.7e-07 59.7 106 37.7
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 3.0e-07 58.9 112 38.4
arahy.Tifrunner.gnm1.ann1.HXSC1S Arachis hypogaea HOM05D008334 ORTHO05D010366 1.9e-06 56.2 108 31.5
CAN.G836.22 Capsicum annuum HOM05D008334 ORTHO05D012551 1.9e-06 56.2 102 34.3
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 1.9e-06 56.2 105 39.0
MELO3C007512.2 Cucumis melo HOM05D037312 ORTHO05D010366 4.3e-06 55.1 102 38.2
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 5.6e-06 54.7 105 34.3
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 5.6e-06 54.7 85 42.4
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 5.6e-06 54.7 103 34.0
Sopen02g034820 Solanum pennellii HOM05D008334 ORTHO05D010366 9.5e-06 53.9 103 34.0


User provided reference genes

Program Settings