Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.9e-158 563.1 466 100.0
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.6e-123 446.4 411 72.5
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.6e-112 409.5 448 65.6
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 8.8e-111 404.8 412 78.9
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 5.3e-108 395.6 412 77.9
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.1e-105 387.9 411 71.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.2e-105 386.0 415 74.5
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 7.2e-105 385.2 412 74.3
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.1e-104 383.6 412 79.6
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 6.1e-104 382.1 411 78.6
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.0e-103 381.3 411 77.1
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 2.6e-102 376.7 399 76.7
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.3e-102 376.3 415 69.2
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.4e-102 375.9 415 73.7
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 3.5e-99 366.3 417 68.8
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 7.7e-99 365.2 405 70.9
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 2.9e-98 363.2 417 66.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 5.5e-97 359.0 422 69.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.6e-96 356.3 412 67.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 6.1e-96 355.5 417 74.8
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 6.1e-96 355.5 415 66.3
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.4e-95 354.4 424 68.9
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.8e-95 354.0 413 70.9
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 5.2e-95 352.4 411 69.8
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.2e-94 351.3 417 68.1
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.8e-94 348.2 402 66.7
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.8e-93 346.7 409 63.1
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 4.8e-93 345.9 423 67.1
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 6.3e-93 345.5 419 74.5
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-92 344.7 411 72.3
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.4e-92 344.4 414 69.3
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.8e-92 344.0 348 75.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.4e-92 343.6 418 70.6
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 4.1e-92 342.8 360 77.5
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 4.1e-92 342.8 423 70.4
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.1e-92 341.7 430 68.8
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 9.1e-92 341.7 431 68.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 7.7e-91 338.6 419 68.5
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.9e-89 334.0 246 76.0
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.9e-89 334.0 246 76.0
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.9e-89 334.0 427 67.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 7.2e-89 332.0 421 67.5
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.2e-88 331.3 351 68.7
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.6e-88 330.9 420 65.7
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 2.7e-88 330.1 429 58.5
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.7e-88 330.1 366 71.6
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 3.6e-88 329.7 423 68.6
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.2e-87 325.9 410 66.8
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.8e-87 325.1 416 68.3
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 2.0e-86 323.9 411 68.1
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.0e-86 323.9 422 67.1
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 2.0e-86 323.9 256 76.2
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.0e-86 323.9 291 71.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 4.4e-86 322.8 253 77.5
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.4e-86 322.8 423 66.9
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 5.7e-86 322.4 422 65.2
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 5.7e-86 322.4 417 63.1
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 7.5e-86 322.0 208 85.1
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 9.8e-86 321.6 411 67.4
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.7e-85 320.9 411 62.5
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.8e-85 320.1 208 86.1
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 6.3e-85 318.9 422 68.5
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.1e-84 318.2 416 66.8
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.4e-84 317.8 421 67.9
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.4e-84 317.8 410 65.1
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.4e-84 317.0 420 65.7
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 5.4e-84 315.8 435 63.2
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 7.0e-84 315.5 435 63.4
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 4.5e-83 312.8 416 63.5
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 3.8e-82 309.7 401 66.3
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.1e-81 308.1 415 71.1
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.9e-81 307.4 417 58.3
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.8e-79 300.8 440 61.8
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.8e-79 300.8 418 69.1
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 5.2e-79 299.3 436 65.1
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.2e-78 298.1 413 69.5
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.4e-76 291.2 210 76.7
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 4.1e-76 289.7 367 66.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 9.2e-76 288.5 210 78.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.3e-74 284.6 356 64.9
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.7e-74 284.3 207 77.8
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 6.6e-74 282.3 259 66.4
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 6.6e-74 282.3 277 58.5
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-73 281.2 165 84.8
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.5e-73 280.4 258 67.4
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 4.7e-72 276.2 165 81.8
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.0e-67 260.8 160 78.1
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.1e-65 255.0 165 75.2
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 7.3e-65 252.3 165 73.9
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 7.3e-65 252.3 165 73.9
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 7.3e-65 252.3 165 73.9
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 7.3e-65 252.3 165 73.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 9.5e-65 251.9 210 68.1
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.8e-64 250.4 147 83.0
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 3.6e-64 250.0 165 73.3
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.2e-62 245.0 167 73.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.9e-60 237.7 217 66.8
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.5e-59 233.4 216 66.2
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.1e-57 228.4 165 70.9
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.2e-56 224.9 162 70.4
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 8.1e-56 222.2 164 67.7
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 6.4e-53 212.6 256 50.4
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.4e-53 212.2 155 82.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-48 197.2 163 60.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-48 197.2 163 60.7
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-47 193.7 166 60.8
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-47 193.7 166 60.8
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 4.4e-38 163.3 152 59.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.3e-33 146.7 165 50.9
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.7e-29 134.8 167 47.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.9e-25 121.3 166 43.4
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.3e-21 108.6 161 42.9
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 7.4e-17 92.8 139 40.3
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-16 90.1 62 74.2
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.4e-15 88.6 266 66.2
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 3.6e-11 73.9 95 46.3
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 5.1e-10 70.1 112 37.5
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 9.0e-07 59.3 82 41.5
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 2.0e-06 58.2 110 33.6


User provided reference genes

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