Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 9.8e-68 260.0 131 100.0
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 2.8e-54 215.3 130 86.9
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 1.1e-29 133.7 134 57.5
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 2.1e-25 119.4 111 61.3
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 2.7e-25 119.0 118 60.2
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 2.7e-25 119.0 111 61.3
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 6.0e-25 117.9 115 60.9
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 6.0e-25 117.9 130 57.7
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 8.7e-24 114.0 120 57.5
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 2.5e-23 112.5 112 62.5
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 4.3e-23 111.7 128 57.0
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 2.1e-22 109.4 103 64.1
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 6.2e-22 107.8 132 53.0
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 8.1e-22 107.5 110 61.8
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.8e-21 106.3 131 55.0
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 3.1e-21 105.5 103 56.3
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 4.0e-21 105.1 134 49.3
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 4.0e-21 105.1 131 54.2
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 4.0e-21 105.1 131 52.7
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 9.0e-21 104.0 124 56.5
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 1.2e-20 103.6 106 57.5
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 1.5e-20 103.2 114 57.0
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 5.8e-20 101.3 124 54.8
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.0e-19 100.5 121 51.2
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 1.0e-19 100.5 119 51.3
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 1.0e-19 100.5 105 57.1
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.7e-19 99.8 124 54.0
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 2.2e-19 99.4 130 48.5
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 3.8e-19 98.6 119 50.4
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 4.9e-19 98.2 117 53.0
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 2.5e-18 95.9 117 53.0
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 2.5e-18 95.9 109 56.9
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 3.2e-18 95.5 88 62.5
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 1.8e-16 89.7 114 51.8
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 1.8e-16 89.7 113 50.4
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 3.9e-16 88.6 88 59.1
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 6.7e-16 87.8 88 58.0
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 1.9e-15 86.3 133 45.1
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.9e-15 86.3 85 58.8
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 2.5e-15 85.9 93 50.5
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 3.3e-15 85.5 100 51.0
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 7.4e-15 84.3 115 53.0
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 1.6e-14 83.2 83 59.0
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 3.7e-14 82.0 128 43.0
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 4.8e-14 81.6 78 57.7
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 6.3e-14 81.3 121 44.6
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.1e-13 80.5 131 38.2
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 1.1e-13 80.5 90 51.1
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 1.8e-13 79.7 111 46.8
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 4.1e-13 78.6 85 51.8
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 4.1e-13 78.6 85 51.8
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 1.2e-12 77.0 98 54.1
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 1.5e-12 76.6 97 53.6
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 2.6e-12 75.9 129 37.2
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.0e-11 73.9 98 50.0
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 1.7e-11 73.2 98 40.8
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 2.9e-11 72.4 100 47.0
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 3.8e-11 72.0 136 37.5
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 3.8e-11 72.0 96 43.8
Ah.03g148720 Amaranthus hybridus HOM05D008224 ORTHO05D010083 5.0e-11 71.6 140 37.9
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 6.5e-11 71.2 89 52.8
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 8.4e-11 70.9 96 44.8
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 8.4e-11 70.9 90 42.2
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 3.2e-10 68.9 81 51.9
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 1.2e-09 67.0 100 42.0
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 1.6e-09 66.6 90 45.6
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 1.6e-09 66.6 101 38.6
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.6e-09 66.6 102 50.0
Sed0001082 Sechium edule HOM05D008224 ORTHO05D010083 2.1e-09 66.2 130 36.2
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 3.0e-08 62.4 96 40.6
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 3.9e-08 62.0 132 35.6
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 1.1e-07 60.5 125 40.0
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.2e-06 56.2 47 61.7
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 3.7e-06 55.5 78 46.2


User provided reference genes

Program Settings