Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.1e-111 406.8 220 100.0
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 6.4e-104 380.9 221 92.3
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.1e-79 300.4 220 72.7
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.1e-79 300.4 222 73.9
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.9e-79 299.7 220 74.1
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 9.3e-79 297.4 221 72.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 4.6e-78 295.0 220 71.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.3e-77 293.5 221 72.9
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.7e-77 291.2 245 68.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.5e-76 290.0 220 70.9
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.5e-76 290.0 220 70.9
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 7.4e-76 287.7 220 72.3
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.3e-75 287.0 221 70.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.1e-75 286.2 225 69.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 8.2e-75 284.3 220 69.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.4e-74 283.5 220 69.5
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-74 282.3 226 68.6
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 3.1e-74 282.3 220 69.5
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 5.3e-74 281.6 223 72.6
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 9.0e-74 280.8 226 69.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.5e-73 280.0 221 67.9
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.0e-73 279.6 220 69.5
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 7.6e-73 277.7 220 69.1
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.3e-72 276.9 220 70.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.2e-72 276.2 220 68.6
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 6.5e-72 274.6 220 66.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.5e-72 274.6 220 66.8
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 6.5e-72 274.6 227 67.0
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.9e-71 273.1 220 68.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.5e-71 272.7 223 70.0
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 3.2e-71 272.3 222 68.5
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.2e-71 271.2 221 68.8
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 9.3e-71 270.8 221 67.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 9.3e-71 270.8 228 64.9
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 9.3e-71 270.8 228 65.8
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.1e-70 269.6 240 64.2
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 3.6e-70 268.9 229 68.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 4.6e-70 268.5 220 66.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.0e-69 267.3 221 69.2
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 3.9e-69 265.4 226 66.8
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 3.3e-68 262.3 227 64.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.3e-68 262.3 149 87.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 5.7e-68 261.5 222 65.8
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.4e-68 261.2 227 66.1
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 9.7e-68 260.8 177 73.4
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.3e-67 260.4 185 71.4
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.2e-67 259.6 155 85.2
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.8e-67 259.2 177 75.7
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.7e-67 258.8 175 75.4
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 8.2e-67 257.7 221 63.8
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.8e-66 256.5 149 85.9
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 9.0e-66 254.2 220 64.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 2.0e-65 253.1 159 81.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.0e-65 253.1 227 64.8
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 3.4e-65 252.3 147 84.4
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.4e-65 252.3 179 72.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 5.9e-65 251.5 222 64.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 7.7e-65 251.1 175 76.6
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.0e-64 250.8 220 64.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.0e-64 250.8 222 62.2
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.8e-64 248.8 172 76.7
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.5e-63 246.1 222 62.2
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.2e-63 245.7 147 83.7
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 3.2e-63 245.7 149 82.6
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 3.2e-63 245.7 222 62.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.2e-63 245.4 220 62.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.2e-62 243.8 174 71.3
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.9e-62 241.1 223 63.2
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.3e-61 239.6 198 67.7
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.9e-61 238.8 152 81.6
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 8.8e-61 237.7 220 60.0
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.0e-60 236.5 148 80.4
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.6e-60 236.1 220 64.1
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 3.3e-60 235.7 148 79.1
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 7.4e-60 234.6 170 71.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.7e-59 232.3 151 80.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 8.2e-59 231.1 149 75.8
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 8.2e-59 231.1 149 75.8
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.4e-58 230.3 224 59.4
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.8e-58 229.9 175 69.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.8e-58 229.9 175 69.1
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.4e-58 229.6 174 73.6
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 4.1e-58 228.8 226 61.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 4.1e-58 228.8 179 69.3
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.2e-57 227.3 222 57.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.5e-57 226.9 179 69.3
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.5e-57 226.9 220 59.1
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-57 226.5 221 61.1
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 6.5e-56 221.5 204 62.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.4e-55 220.3 225 58.2
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 9.4e-55 217.6 128 82.0
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.1e-54 216.5 226 57.5
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 5.2e-53 211.8 211 57.3
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 8.8e-53 211.1 135 74.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.5e-52 210.3 245 55.1
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.6e-52 209.5 221 55.2
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 4.8e-51 205.3 165 60.6
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.5e-49 199.1 109 91.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 4.5e-49 198.7 152 62.5
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.1e-46 188.3 108 85.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.4e-45 187.2 148 62.8
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 6.3e-43 178.3 179 58.1
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.4e-42 177.2 110 81.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.2e-40 169.9 155 61.9
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.2e-39 166.0 159 57.9
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.1e-38 163.3 155 59.4
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.8e-34 150.2 157 58.0
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 4.5e-33 145.6 169 53.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 4.5e-33 145.6 101 69.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 7.2e-31 138.3 72 93.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 4.9e-27 125.6 147 43.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.2e-22 110.9 68 79.4
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.2e-22 110.9 68 79.4
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 6.1e-22 108.6 110 55.5
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.8e-17 91.7 58 74.1
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.3e-15 85.9 52 80.8
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 8.1e-06 55.1 36 69.4


User provided reference genes

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