Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 5.1e-66 254.2 125 100.0
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.8e-35 152.1 116 68.1
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 4.7e-35 151.4 117 65.8
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 8.9e-34 147.1 113 65.5
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 8.9e-34 147.1 116 66.4
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 2.6e-33 145.6 119 64.7
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 4.4e-33 144.8 119 64.7
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 4.4e-33 144.8 115 66.1
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 5.7e-33 144.4 120 63.3
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 2.8e-32 142.1 111 65.8
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 6.3e-32 141.0 121 63.6
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 8.3e-32 140.6 118 63.6
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.1e-31 140.2 105 68.6
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 3.1e-31 138.7 114 63.2
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 9.2e-31 137.1 118 62.7
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 9.2e-31 137.1 118 62.7
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 9.2e-31 137.1 113 62.8
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 3.5e-30 135.2 118 61.0
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 3.5e-30 135.2 120 60.8
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.0e-29 131.3 116 58.6
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.1e-28 130.2 108 64.8
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.1e-28 130.2 100 64.0
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.5e-28 129.8 122 58.2
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 1.9e-28 129.4 104 64.4
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 1.9e-28 129.4 104 64.4
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 2.5e-28 129.0 111 64.0
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 2.5e-28 129.0 112 61.6
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 4.3e-28 128.3 122 55.7
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.2e-27 126.7 111 63.1
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 2.1e-27 125.9 126 55.6
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 6.1e-27 124.4 115 60.9
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 1.0e-26 123.6 118 56.8
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.4e-26 123.2 115 60.0
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 3.0e-26 122.1 118 57.6
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 6.8e-26 120.9 117 54.7
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 8.9e-26 120.6 117 55.6
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.2e-25 120.2 113 57.5
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 2.0e-25 119.4 112 57.1
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 2.0e-25 119.4 114 53.5
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.6e-25 119.0 114 57.0
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.6e-25 119.0 114 57.0
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 2.6e-25 119.0 106 56.6
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 3.4e-25 118.6 102 61.8
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 4.4e-25 118.2 116 56.0
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 4.4e-25 118.2 121 54.5
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 4.4e-25 118.2 115 53.0
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.8e-25 117.9 114 56.1
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.7e-24 116.3 105 56.2
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 6.4e-24 114.4 107 54.2
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 6.4e-24 114.4 102 52.9
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 8.3e-24 114.0 113 55.8
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 3.2e-23 112.1 99 56.6
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 5.4e-23 111.3 111 54.1
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 7.0e-23 110.9 109 52.3
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.2e-22 110.2 125 51.2
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 3.5e-22 108.6 98 54.1
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 3.5e-22 108.6 111 53.2
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 6.0e-22 107.8 111 57.7
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 7.8e-22 107.5 104 52.9
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 7.8e-22 107.5 118 44.9
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 7.8e-22 107.5 111 49.5
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.7e-21 106.3 118 44.1
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.7e-21 106.3 103 52.4
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 5.0e-21 104.8 105 55.2
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 5.0e-21 104.8 102 51.0
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 6.6e-21 104.4 118 52.5
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 8.6e-21 104.0 104 52.9
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 1.5e-20 103.2 104 52.9
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 1.9e-20 102.8 97 55.7
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 1.9e-20 102.8 96 57.3
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 2.5e-20 102.4 104 52.9
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 3.3e-20 102.1 104 50.0
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 4.3e-20 101.7 111 47.7
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 5.6e-20 101.3 104 51.0
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 5.6e-20 101.3 104 51.0
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 5.6e-20 101.3 113 50.4
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 5.6e-20 101.3 93 54.8
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 7.3e-20 100.9 103 52.4
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 1.2e-19 100.1 104 51.0
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 2.1e-19 99.4 83 60.2
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 3.6e-19 98.6 104 51.0
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 1.1e-18 97.1 104 50.0
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 1.1e-18 97.1 104 50.0
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 1.1e-18 97.1 104 50.0
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 1.8e-18 96.3 106 50.0
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 2.3e-18 95.9 104 51.0
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 2.3e-18 95.9 104 51.0
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 3.4e-17 92.0 101 50.5
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 6.4e-16 87.8 92 56.5
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 2.4e-15 85.9 98 45.9
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 5.4e-15 84.7 82 58.5
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 7.0e-15 84.3 82 53.7
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 2.3e-13 79.3 73 54.8
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 3.6e-11 72.0 66 62.1
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 1.8e-10 69.7 72 48.6
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 1.8e-10 69.7 72 48.6
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 3.1e-10 68.9 64 46.9
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 5.2e-10 68.2 68 54.4
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 2.0e-09 66.2 88 44.3
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 5.8e-09 64.7 63 54.0
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.2e-06 57.0 60 45.0
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 7.8e-06 54.3 64 45.3


User provided reference genes

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