Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.0e-87 325.1 160 100.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 4.7e-64 248.1 158 76.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-62 243.0 160 75.0
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.9e-61 238.0 161 75.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 9.2e-60 233.8 161 73.9
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.6e-59 233.0 175 73.1
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.1e-59 232.6 161 73.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 3.5e-59 231.9 161 71.4
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.6e-59 231.5 163 71.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 6.0e-59 231.1 161 67.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.0e-58 230.3 161 70.2
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.3e-58 229.2 148 75.0
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 5.1e-58 228.0 161 67.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.6e-58 227.6 141 75.2
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 7.3e-57 224.2 149 73.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.2e-56 223.4 148 72.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.2e-56 223.4 157 70.7
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.6e-56 223.0 149 72.5
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 2.8e-56 222.2 147 73.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 4.7e-56 221.5 147 72.8
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 4.7e-56 221.5 149 72.5
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 6.2e-56 221.1 160 66.9
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.1e-55 220.3 160 65.0
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.4e-55 219.9 162 66.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.8e-55 219.5 146 71.9
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.8e-55 219.5 162 68.5
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 4.0e-55 218.4 162 66.0
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 4.0e-55 218.4 148 69.6
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 6.8e-55 217.6 162 66.0
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.5e-54 216.5 165 66.7
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 3.4e-54 215.3 160 66.2
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.4e-54 215.3 157 63.7
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 4.4e-54 214.9 163 65.0
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.4e-54 214.9 161 64.6
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 5.8e-54 214.5 161 65.2
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 5.8e-54 214.5 161 67.7
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 7.5e-54 214.2 146 72.6
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 7.5e-54 214.2 152 67.1
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.3e-53 213.4 163 66.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.2e-53 212.6 159 64.2
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.9e-53 212.2 145 73.1
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 4.9e-53 211.5 161 70.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 4.9e-53 211.5 148 70.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 6.4e-53 211.1 163 65.6
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 8.3e-53 210.7 159 63.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.1e-52 210.3 138 71.7
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.4e-52 209.9 149 66.4
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.4e-52 209.9 192 58.9
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.9e-52 209.5 140 73.6
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 2.4e-52 209.1 164 66.5
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 9.2e-52 207.2 158 62.7
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.2e-51 206.8 160 63.8
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.2e-51 206.8 155 68.4
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.6e-51 206.5 149 63.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.6e-51 206.5 149 65.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.1e-51 206.1 149 65.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.5e-51 205.3 162 61.1
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.0e-51 204.5 137 70.8
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.7e-50 203.0 157 66.2
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.7e-50 203.0 138 71.0
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 2.3e-50 202.6 212 50.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.1e-49 200.3 149 62.4
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.3e-49 198.7 149 61.7
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 4.3e-49 198.4 149 64.4
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 9.5e-49 197.2 149 60.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 9.5e-49 197.2 159 62.9
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 9.5e-49 197.2 150 62.7
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.2e-48 196.8 149 62.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 3.6e-48 195.3 140 65.0
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.4e-47 193.4 159 63.5
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.4e-47 193.4 141 67.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.5e-46 189.9 138 66.7
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.4e-46 188.7 146 65.1
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 5.8e-46 188.0 155 56.8
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 9.9e-46 187.2 170 54.1
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.2e-45 186.0 153 60.1
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.8e-45 185.3 157 55.4
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 4.9e-45 184.9 147 63.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.2e-44 182.2 163 54.6
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 3.2e-44 182.2 160 57.5
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.6e-43 179.9 141 61.7
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.7e-43 179.1 147 58.5
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 7.8e-43 177.6 143 60.1
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 7.3e-33 144.4 131 58.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.6e-32 142.1 109 59.6
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 5.8e-30 134.8 154 44.8
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.7e-27 125.9 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 9.6e-25 117.5 145 45.5
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 8.1e-24 114.4 143 40.6
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 7.6e-22 107.8 136 39.7
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 2.5e-20 102.8 75 64.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 3.2e-20 102.4 75 64.0
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.7e-19 99.4 59 72.9
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.0e-18 97.4 95 53.7
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 3.4e-14 82.4 62 61.3
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.2e-12 75.9 104 39.4
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 7.1e-12 74.7 64 56.2
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 8.2e-08 61.2 68 47.1


User provided reference genes

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