Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 9.4e-110 400.2 203 100.0
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 7.0e-97 357.5 203 90.1
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 4.7e-69 265.0 199 72.4
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.1e-68 263.8 199 70.9
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.8e-68 263.1 199 69.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 4.0e-68 261.9 200 69.5
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 3.4e-67 258.8 197 69.5
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 4.4e-67 258.5 197 68.5
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.7e-66 256.5 206 68.9
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 2.2e-66 256.1 201 67.2
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.9e-66 255.8 199 68.8
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 4.9e-66 255.0 199 68.3
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 4.9e-66 255.0 199 68.3
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 8.4e-66 254.2 201 65.7
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 4.1e-65 251.9 200 70.0
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 5.4e-65 251.5 200 68.5
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 7.1e-65 251.1 210 66.2
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.2e-64 250.4 199 67.8
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.6e-64 250.0 205 64.4
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.6e-64 250.0 198 68.7
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 7.8e-64 247.7 197 67.5
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.3e-63 246.1 199 65.8
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 8.6e-63 244.2 174 72.4
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 8.6e-63 244.2 201 67.7
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.1e-62 243.8 202 64.4
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.5e-62 243.4 174 72.4
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 2.5e-62 242.7 201 64.7
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 5.6e-62 241.5 202 65.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.2e-61 240.4 197 66.5
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.2e-61 240.4 201 66.2
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.2e-61 240.4 200 67.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.6e-61 240.0 204 66.2
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.6e-61 240.0 199 65.3
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.4e-60 236.9 203 63.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-60 236.5 201 65.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 2.4e-60 236.1 200 65.5
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.4e-60 236.1 197 66.0
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.1e-60 235.7 204 65.2
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 5.2e-60 235.0 203 65.5
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 8.9e-60 234.2 200 64.0
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 8.9e-60 234.2 198 65.2
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.5e-59 233.4 193 65.8
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 2.6e-59 232.6 210 63.8
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 2.2e-58 229.6 196 64.3
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 2.2e-58 229.6 201 61.7
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 3.8e-58 228.8 204 64.2
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 6.4e-58 228.0 202 58.9
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 6.4e-58 228.0 204 63.7
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-57 227.3 203 63.5
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.1e-57 227.3 198 63.6
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.4e-57 226.9 202 58.9
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.9e-57 226.5 202 58.9
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.9e-57 226.5 202 58.9
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.9e-57 226.5 202 58.9
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.4e-57 226.1 207 57.5
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 4.2e-57 225.3 203 58.6
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 4.2e-57 225.3 212 59.9
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 5.4e-57 224.9 197 62.4
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.2e-56 223.8 209 57.4
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.2e-56 223.8 210 60.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.6e-56 223.4 206 57.3
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.6e-56 223.4 208 58.2
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.6e-56 223.4 196 62.2
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.7e-56 222.6 200 63.0
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 2.7e-56 222.6 196 62.2
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 3.5e-56 222.2 201 65.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 3.5e-56 222.2 201 61.2
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 4.6e-56 221.9 200 61.0
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 6.0e-56 221.5 202 60.4
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 6.0e-56 221.5 200 62.5
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 7.8e-56 221.1 201 60.7
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 3.0e-55 219.2 165 67.9
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 3.9e-55 218.8 171 64.9
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 5.1e-55 218.4 205 60.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 4.3e-54 215.3 204 58.3
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.6e-53 213.4 181 61.9
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 2.8e-53 212.6 193 61.1
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 3.6e-53 212.2 200 59.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 3.6e-53 212.2 170 69.4
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.4e-52 210.3 147 76.9
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 3.1e-52 209.1 187 61.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 4.0e-52 208.8 195 61.0
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 4.0e-52 208.8 216 56.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.3e-52 208.4 188 61.7
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.0e-51 206.5 199 56.3
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 2.2e-50 203.0 203 55.7
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.9e-49 199.9 195 57.9
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.1e-48 196.4 208 54.3
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 7.9e-48 194.5 211 52.1
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 2.3e-47 193.0 210 51.0
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.9e-46 189.9 155 63.9
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 4.3e-46 188.7 197 53.3
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.6e-45 185.7 199 52.3
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.6e-45 185.7 155 60.6
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.4e-44 183.7 205 51.7
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.1e-44 182.6 170 57.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 4.0e-44 182.2 201 49.8
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 9.0e-44 181.0 210 50.0
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.8e-42 175.6 212 45.8
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.2e-40 170.6 157 53.5
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 3.7e-37 159.1 155 55.5
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.0e-31 141.0 182 42.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.1e-30 137.5 92 67.4
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 9.0e-28 127.9 166 46.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.0e-23 112.8 117 52.1
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.7e-18 97.1 119 50.4
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 6.5e-18 95.1 145 37.9
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.5e-17 93.2 143 34.3
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.2e-17 91.7 143 34.3
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.1e-16 90.1 111 51.4
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 5.1e-15 85.5 146 35.6
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 4.8e-13 79.0 155 33.5
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 6.3e-13 78.6 105 45.7
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 3.1e-12 76.3 143 33.6
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 4.5e-11 72.4 152 29.6
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 6.5e-10 68.6 72 50.0


User provided reference genes

Program Settings