Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.9e-151 538.5 265 100.0
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 9.4e-126 453.8 265 87.5
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 7.4e-123 444.1 265 82.6
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.4e-121 439.1 275 80.0
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.1e-121 438.7 275 80.0
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 1.7e-119 433.0 265 80.8
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 7.2e-118 427.6 296 75.0
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 6.1e-117 424.5 281 76.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.8e-116 422.9 266 77.4
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 2.8e-114 415.6 271 77.5
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 5.9e-112 407.9 265 75.1
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 2.9e-111 405.6 268 75.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 8.5e-111 404.1 273 76.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 4.2e-110 401.7 283 73.5
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 9.4e-110 400.6 267 72.7
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 9.4e-110 400.6 275 75.3
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 2.1e-109 399.4 266 72.9
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.4e-108 396.7 318 65.1
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 8.8e-108 394.0 276 72.8
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 8.8e-108 394.0 265 73.2
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.7e-106 389.8 269 72.1
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.7e-106 389.8 301 68.1
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.8e-106 389.0 266 72.2
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 2.8e-106 389.0 266 74.1
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.8e-106 389.0 272 73.2
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.7e-106 388.7 265 72.1
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 6.3e-106 387.9 265 71.7
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 8.3e-106 387.5 274 71.9
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.8e-105 386.3 265 72.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 9.1e-105 384.0 266 72.9
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 5.9e-104 381.3 264 72.7
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 7.7e-104 380.9 262 71.4
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 7.7e-104 380.9 262 71.4
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.0e-103 380.6 262 71.4
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.7e-103 379.8 269 70.3
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 6.5e-103 377.9 263 71.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 8.5e-103 377.5 269 69.5
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.5e-102 376.7 271 71.2
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.2e-102 375.6 277 69.7
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 9.4e-102 374.0 271 70.1
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.2e-101 373.6 267 70.8
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.6e-101 373.2 269 70.3
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 2.1e-101 372.9 274 67.9
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 2.7e-101 372.5 269 69.1
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.7e-101 372.5 269 69.9
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.4e-100 370.2 271 68.3
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.4e-100 370.2 269 71.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.8e-100 369.8 351 58.1
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 8.8e-100 367.5 250 72.4
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.2e-99 367.1 270 68.9
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 9.8e-99 364.0 297 68.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 1.3e-98 363.6 268 69.8
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.3e-98 363.6 275 69.1
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.7e-98 363.2 314 63.7
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.7e-98 363.2 267 68.5
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.2e-98 362.8 283 66.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 2.2e-98 362.8 274 69.0
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.8e-98 362.5 275 66.9
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 3.7e-98 362.1 268 68.7
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 3.7e-98 362.1 281 69.4
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 8.3e-98 360.9 269 71.4
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.4e-97 360.1 242 71.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 5.4e-97 358.2 275 65.8
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 5.4e-97 358.2 271 67.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 7.0e-97 357.8 276 66.3
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.0e-96 356.3 266 67.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.0e-96 356.3 333 58.9
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.5e-94 350.1 273 66.7
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 2.1e-93 346.3 225 75.1
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 2.1e-93 346.3 224 71.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 2.8e-93 345.9 268 66.0
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.5e-91 340.1 230 75.2
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 2.2e-90 336.3 207 75.8
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 2.2e-90 336.3 227 73.1
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.8e-89 333.2 272 65.8
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.0e-88 329.7 273 65.2
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.7e-88 329.3 244 68.9
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.0e-87 327.4 264 64.0
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.3e-87 327.0 272 61.4
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.4e-84 317.0 318 56.6
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 3.7e-82 308.9 202 74.8
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 2.4e-81 306.2 191 77.0
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 2.4e-81 306.2 190 78.4
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 5.4e-81 305.1 189 78.8
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.3e-79 299.7 247 63.6
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 8.6e-79 297.7 189 77.2
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.3e-78 295.4 241 63.5
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.6e-77 293.5 180 78.9
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.4e-76 290.4 191 75.4
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.2e-75 287.3 264 61.4
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 5.8e-75 285.0 245 62.9
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.9e-73 280.0 190 73.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 1.9e-73 280.0 238 59.7
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 3.9e-71 272.3 240 59.2
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.8e-68 263.5 234 55.6
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.5e-67 260.4 282 53.5
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 7.5e-67 258.1 194 68.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.1e-65 254.2 208 57.2
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 2.8e-61 239.6 284 44.7
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.8e-60 236.9 130 83.1
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 7.1e-57 224.9 221 48.4
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.1e-54 217.6 215 48.4
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 4.3e-54 215.7 165 57.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.2e-51 207.6 165 57.0
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 8.4e-50 201.4 136 75.7
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 3.2e-49 199.5 190 57.9
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.1e-45 186.8 187 56.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.3e-38 162.9 195 39.5
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.7e-34 150.6 221 43.0
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.9e-30 137.1 107 65.4
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.4e-28 131.0 76 84.2
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.5e-22 110.9 56 87.5
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.3e-21 107.8 59 79.7
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.2e-21 107.1 99 61.6
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 5.3e-20 102.4 96 55.2
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 5.9e-19 99.0 59 76.3
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.7e-18 97.4 90 53.3
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 6.7e-15 85.5 87 48.3
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 7.4e-14 82.0 84 53.6
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.4e-11 73.2 87 51.7
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 8.8e-07 58.5 64 54.7


User provided reference genes

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