Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G074350 Populus trichocarpa HOM05D008282 ORTHO05D009173 8.7e-46 186.4 83 100.0
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.1e-19 99.8 84 54.8
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.4e-19 99.4 84 54.8
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 2.4e-19 98.6 83 55.4
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 7.2e-16 87.0 85 51.8
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 7.2e-16 87.0 85 51.8
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 2.1e-15 85.5 85 50.6
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 4.7e-15 84.3 58 55.2
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 2.3e-14 82.0 77 46.8
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 4.4e-13 77.8 86 46.5
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 5.7e-13 77.4 85 48.2
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 7.5e-13 77.0 84 47.6
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 1.3e-12 76.3 96 42.7
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.7e-12 75.9 77 48.1
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 3.7e-12 74.7 94 42.6
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 3.7e-12 74.7 94 40.4
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 4.8e-12 74.3 60 53.3
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 6.3e-12 73.9 88 44.3
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 8.3e-12 73.6 85 47.1
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 1.1e-11 73.2 91 42.9
FvH4_4g06730 Fragaria vesca HOM05D008282 ORTHO05D009173 1.1e-11 73.2 83 41.0
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.1e-11 73.2 60 53.3
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.8e-11 72.4 60 53.3
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.8e-11 72.4 60 53.3
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.8e-11 72.4 60 53.3
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.4e-11 72.0 60 53.3
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 2.4e-11 72.0 84 44.0
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 4.1e-11 71.2 86 44.2
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 4.1e-11 71.2 97 40.2
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 9.1e-11 70.1 56 55.4
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 9.1e-11 70.1 84 40.5
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 1.6e-10 69.3 94 41.5
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 2.0e-10 68.9 54 53.7
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 4.5e-10 67.8 86 43.0
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 4.5e-10 67.8 60 48.3
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 4.5e-10 67.8 60 51.7
Hma1.2p1_1289F.1_g273360 Hydrangea macrophylla HOM05D009110 ORTHO05D011182 2.9e-09 65.1 86 39.5
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 3.8e-09 64.7 60 46.7
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 5.0e-09 64.3 93 39.8
THA.LOC109116863 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 6.5e-09 63.9 83 38.6
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 8.5e-09 63.5 78 44.9
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 1.1e-08 63.2 85 38.8
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 1.5e-08 62.8 85 40.0
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 1.5e-08 62.8 85 40.0
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 1.5e-08 62.8 85 40.0
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 1.5e-08 62.8 85 40.0
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 1.9e-08 62.4 80 46.2
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 2.5e-08 62.0 77 44.2
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 9.4e-08 60.1 77 42.9
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.2e-07 59.7 84 39.3
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 1.6e-07 59.3 77 37.7
THA.LOC104807177 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 1.6e-07 59.3 84 33.3
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 2.7e-07 58.5 89 37.1
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 2.7e-07 58.5 53 52.8
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 6.1e-07 57.4 60 46.7
Thhalv10001718m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 1.4e-06 56.2 79 38.0
THA.LOC104807176 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 6.8e-06 53.9 84 31.0
THA.LOC109116535 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 6.8e-06 53.9 84 31.0


User provided reference genes

Program Settings