Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 3.6e-52 208.0 107 100.0
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 9.2e-48 193.4 107 91.6
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 3.4e-42 174.9 107 83.2
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.3e-41 172.9 107 83.2
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 5.8e-34 147.5 104 74.0
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 7.6e-34 147.1 107 67.3
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 1.3e-33 146.4 107 70.1
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.3e-33 146.4 106 67.9
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.7e-33 146.0 104 73.1
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 2.2e-33 145.6 104 71.2
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 2.2e-33 145.6 106 71.7
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 3.8e-33 144.8 104 73.1
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 6.4e-33 144.1 107 67.3
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.1e-32 143.3 108 70.4
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.4e-32 142.9 107 66.4
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.4e-32 142.9 107 66.4
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 3.5e-31 138.3 107 65.4
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 7.8e-31 137.1 104 66.3
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.0e-30 136.7 106 68.9
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 1.7e-30 136.0 108 65.7
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.7e-30 136.0 107 65.4
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 3.0e-30 135.2 99 67.7
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 2.5e-29 132.1 103 66.0
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 2.5e-29 132.1 105 66.7
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 4.3e-29 131.3 103 64.1
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.6e-28 129.4 109 67.0
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.6e-28 129.4 104 65.4
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 3.6e-28 128.3 103 65.0
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.8e-28 127.9 93 67.7
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 6.2e-28 127.5 118 61.0
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.1e-27 126.7 98 64.3
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.4e-27 126.3 118 61.9
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.4e-27 126.3 106 62.3
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.4e-27 126.3 103 65.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.8e-27 125.9 109 64.2
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.4e-27 125.6 103 65.0
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 2.4e-27 125.6 107 63.6
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 5.3e-27 124.4 107 64.5
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 5.3e-27 124.4 112 62.5
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.2e-26 123.2 118 59.3
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.5e-26 122.9 91 67.0
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 1.5e-26 122.9 106 60.4
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 1.5e-26 122.9 106 60.4
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.0e-26 122.5 107 61.7
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.0e-26 122.5 105 63.8
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 2.0e-26 122.5 97 63.9
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.6e-26 122.1 112 60.7
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 4.5e-26 121.3 119 58.0
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 5.8e-26 120.9 114 59.6
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 5.8e-26 120.9 103 64.1
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 7.6e-26 120.6 125 57.6
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 7.6e-26 120.6 93 66.7
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 9.9e-26 120.2 97 63.9
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 9.9e-26 120.2 104 62.5
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 9.9e-26 120.2 125 56.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.3e-25 119.8 107 59.8
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.7e-25 119.4 107 57.9
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 1.7e-25 119.4 106 62.3
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 2.2e-25 119.0 111 56.8
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 2.2e-25 119.0 107 60.7
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 2.9e-25 118.6 106 54.7
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.9e-25 117.9 107 59.8
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 6.4e-25 117.5 114 57.0
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 6.4e-25 117.5 114 57.0
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 8.4e-25 117.1 116 57.8
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 8.4e-25 117.1 102 54.9
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.1e-24 116.7 97 59.8
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 1.4e-24 116.3 109 56.9
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 1.9e-24 115.9 114 58.8
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 1.9e-24 115.9 109 57.8
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 4.2e-24 114.8 108 56.5
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 5.4e-24 114.4 112 57.1
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 7.1e-24 114.0 114 54.4
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 9.3e-24 113.6 112 55.4
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 9.3e-24 113.6 108 55.6
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 9.3e-24 113.6 106 57.5
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.1e-23 112.5 106 57.5
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 2.7e-23 112.1 96 58.3
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.5e-23 111.7 71 73.2
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 4.6e-23 111.3 109 56.0
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 4.6e-23 111.3 109 56.0
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 4.6e-23 111.3 109 55.0
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 4.6e-23 111.3 93 63.4
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 6.0e-23 110.9 104 55.8
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 6.0e-23 110.9 101 57.4
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 6.0e-23 110.9 93 63.4
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 7.9e-23 110.5 105 55.2
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.9e-23 110.5 106 55.7
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.0e-22 110.2 126 50.8
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.3e-22 109.8 109 55.0
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 3.0e-22 108.6 107 54.2
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 3.0e-22 108.6 108 54.6
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 3.0e-22 108.6 108 54.6
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 3.0e-22 108.6 108 54.6
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 3.9e-22 108.2 107 54.2
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 3.9e-22 108.2 95 61.1
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.9e-22 108.2 106 55.7
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 5.1e-22 107.8 105 54.3
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 5.1e-22 107.8 107 53.3
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 6.7e-22 107.5 103 59.2
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.1e-21 106.7 107 51.4
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.9e-21 105.9 104 52.9
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 2.5e-21 105.5 109 53.2
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.3e-21 105.1 70 68.6
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 5.6e-21 104.4 72 68.1
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 5.6e-21 104.4 70 67.1
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 5.6e-21 104.4 116 50.9
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 7.4e-21 104.0 98 54.1
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 9.6e-21 103.6 102 56.9
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 9.6e-21 103.6 87 58.6
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 1.3e-20 103.2 102 52.9
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.3e-20 103.2 83 61.4
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.3e-20 103.2 106 53.8
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 2.1e-20 102.4 102 52.9
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.1e-20 102.4 78 62.8
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.4e-19 99.0 96 54.2
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 9.0e-19 97.1 112 50.0
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 1.2e-18 96.7 95 53.7
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 2.9e-17 92.0 58 72.4
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.4e-16 89.0 71 54.9
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 7.1e-16 87.4 101 46.5
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.6e-15 86.3 55 70.9
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 3.3e-13 78.6 60 56.7
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 1.4e-11 73.2 60 51.7
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 4.0e-11 71.6 60 55.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 1.5e-10 69.7 90 41.1
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 3.4e-10 68.6 54 72.2
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 3.5e-07 58.5 53 56.6
Ca_10674_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 5.1e-06 54.7 44 63.6


User provided reference genes

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