Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 1.1e-131 473.4 253 100.0
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 5.5e-75 285.0 264 60.2
Sabra05G0042800 Salix brachista HOM05D009433 ORTHO05D010667 2.0e-56 223.4 247 55.1
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 2.2e-55 219.9 266 50.4
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 3.2e-30 136.3 220 42.3
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 3.3e-27 126.3 306 34.6
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 7.5e-24 115.2 331 34.1
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 9.2e-22 108.2 219 41.6
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 8.6e-20 101.7 285 31.2
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 1.1e-19 101.3 292 33.9
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 1.9e-19 100.5 278 32.4
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 9.5e-19 98.2 264 33.3
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 4.7e-18 95.9 341 27.3
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 6.2e-18 95.5 286 32.5
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 4.1e-14 82.8 409 26.7
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 7.1e-14 82.0 187 35.8
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 9.2e-14 81.6 333 26.1
FAN05G2376 Fragaria x ananassa HOM05D014796 ORTHO05D010667 9.2e-14 81.6 211 30.3
Gohir.D13G176900 Gossypium hirsutum HOM05D009433 ORTHO05D010667 1.6e-13 80.9 319 27.3
Haze_04298 Corylus avellana HOM05D009433 ORTHO05D010667 4.6e-13 79.3 86 48.8
Gorai.013G202300 Gossypium raimondii HOM05D009433 ORTHO05D010667 6.0e-13 79.0 314 27.1
FAN09G0699 Fragaria x ananassa HOM05D014796 ORTHO05D010667 7.8e-13 78.6 223 29.6
FAN02G2459 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.0e-12 78.2 214 29.4
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.7e-12 77.4 161 31.1
FAN05G2611 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.7e-12 77.4 208 30.3
FAN14G0553 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.7e-12 77.4 232 31.0
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 3.0e-12 76.6 257 32.7
CiPaw.07G009500 Carya illinoinensis HOM05D009433 ORTHO05D010667 2.5e-11 73.6 274 30.7
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 4.3e-11 72.8 161 31.1
Gohir.A13G171500 Gossypium hirsutum HOM05D009433 ORTHO05D010667 2.8e-10 70.1 334 25.4
Aqoxy5G00608 Aquilegia oxysepala HOM05D009433 ORTHO05D010667 6.2e-10 68.9 206 32.5
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 6.2e-10 68.9 168 33.9
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 8.1e-10 68.6 336 25.3
QL03p001021 Quercus lobata HOM05D009433 ORTHO05D010667 1.8e-09 67.4 87 46.0
Cfa006491 Carpinus fangiana HOM05D009433 ORTHO05D010667 5.2e-09 65.9 86 41.9
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 5.8e-08 62.4 210 30.0
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 7.6e-08 62.0 88 42.0
CiPaw.08G177600 Carya illinoinensis HOM05D009433 ORTHO05D010667 9.9e-08 61.6 376 25.5
PGR004G0763 Punica granatum HOM05D047824 ORTHO05D050612 4.9e-07 59.3 138 34.8
QL03p001016 Quercus lobata HOM05D009433 ORTHO05D010667 1.4e-06 57.8 85 40.0
COL.COLO4_13630 Corchorus olitorius HOM05D009433 ORTHO05D010667 2.4e-06 57.0 94 40.4


User provided reference genes

Program Settings