Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 3.1e-204 715.7 627 100.0
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 1.3e-141 507.7 582 65.5
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 9.4e-108 395.2 627 56.8
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 5.1e-98 362.8 627 53.4
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 5.7e-73 279.6 582 45.2
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 4.3e-68 263.5 635 44.1
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 6.8e-66 256.1 637 43.2
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 2.2e-64 251.1 592 43.4
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 8.3e-48 196.1 636 39.5
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 6.0e-46 189.9 636 37.9
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.9e-45 187.2 639 33.0
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.1e-44 185.7 630 35.2
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.5e-44 185.3 651 31.5
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 2.6e-41 174.5 261 42.9
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 9.2e-39 166.0 619 29.2
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.6e-38 165.2 668 35.6
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 7.3e-36 156.4 312 39.1
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 2.4e-34 151.4 669 31.8
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 6.9e-34 149.8 494 33.2
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 9.9e-33 146.0 618 28.6
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 4.9e-32 143.7 619 28.4
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 1.4e-31 142.1 582 36.1
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 2.4e-31 141.4 475 27.8
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.4e-31 141.4 664 26.7
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.4e-31 141.4 637 32.3
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.2e-30 139.0 582 39.2
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.7e-29 135.2 629 31.6
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.9e-29 134.0 665 25.7
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.9e-28 131.7 665 25.6
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 2.5e-28 131.3 584 32.2
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.3e-28 131.0 651 30.6
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 7.3e-28 129.8 585 25.0
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 1.6e-27 128.6 457 26.5
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 1.6e-27 128.6 628 36.5
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 2.8e-27 127.9 269 34.2
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 4.8e-27 127.1 660 23.8
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 1.1e-26 125.9 630 26.3
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 1.8e-26 125.2 582 41.9
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 5.3e-26 123.6 307 33.9
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 6.9e-26 123.2 228 36.8
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 9.0e-26 122.9 626 23.8
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.2e-25 122.5 582 34.4
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 2.0e-25 121.7 646 28.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 2.0e-25 121.7 499 35.9
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.6e-25 121.3 228 36.4
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 4.5e-25 120.6 477 31.9
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 7.6e-25 119.8 582 35.7
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.8e-24 117.5 582 37.5
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 4.9e-24 117.1 632 27.4
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 8.4e-24 116.3 327 33.9
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 1.4e-23 115.5 639 41.2
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.4e-23 115.5 207 36.7
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.4e-23 114.8 582 31.6
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 7.1e-23 113.2 637 24.8
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 9.3e-23 112.8 658 26.3
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.6e-22 112.1 636 32.4
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 3.5e-22 110.9 630 25.2
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 3.5e-22 110.9 268 46.6
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.8e-21 108.6 497 28.6
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 6.7e-21 106.7 635 24.3
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.5e-20 105.5 635 26.9
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 3.3e-20 104.4 632 22.9
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 3.6e-19 100.9 302 29.8
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 6.2e-19 100.1 582 33.2
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 8.1e-19 99.8 658 30.5
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 2.4e-18 98.2 322 28.0
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 5.3e-18 97.1 277 27.4
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 5.3e-18 97.1 639 29.4
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 9.0e-18 96.3 325 28.0
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 3.4e-17 94.4 204 32.8
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 9.9e-17 92.8 115 48.7
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.2e-16 91.7 635 35.0
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 2.2e-16 91.7 315 29.2
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 4.9e-16 90.5 247 38.5
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 6.4e-16 90.1 257 30.7
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 2.4e-15 88.2 651 24.1
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 2.4e-15 88.2 651 24.1
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.6e-14 85.5 394 25.4
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 2.1e-14 85.1 265 31.7
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 2.1e-14 85.1 627 30.6
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 2.7e-14 84.7 231 37.7
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.5e-14 84.3 632 34.2
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.5e-14 84.3 660 26.8
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.6e-14 84.0 655 33.7
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 4.6e-14 84.0 662 27.3
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 6.0e-14 83.6 586 28.8
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 6.0e-14 83.6 322 27.3
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 1.3e-13 82.4 222 30.6
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 2.3e-13 81.6 631 33.3
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 3.9e-13 80.9 328 26.8
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 1.1e-12 79.3 323 31.3
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 1.1e-12 79.3 593 35.2
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 1.9e-12 78.6 632 29.9
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 3.3e-12 77.8 116 42.2
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 5.6e-12 77.0 116 42.2
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 7.4e-12 76.6 582 36.4
AL3G15330 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.1e-11 75.1 256 25.4
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.8e-11 74.7 114 40.4
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 3.7e-11 74.3 267 30.0
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 3.7e-11 74.3 107 45.8
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 3.7e-11 74.3 112 46.4
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 6.2e-11 73.6 114 39.5
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.1e-10 72.8 277 28.2
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 1.4e-10 72.4 583 28.5
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 4.0e-10 70.9 275 25.5
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 4.0e-10 70.9 275 25.5
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 5.3e-10 70.5 283 24.0
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 6.9e-10 70.1 292 24.7
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.5e-09 68.9 121 39.7
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 2.0e-09 68.6 225 28.0
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 5.8e-09 67.0 148 31.1
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 1.0e-08 66.2 119 42.9
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 2.2e-08 65.1 118 40.7
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 2.2e-08 65.1 657 23.0
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 3.8e-08 64.3 119 38.7
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 3.8e-08 64.3 117 42.7
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 6.5e-08 63.5 603 32.8
Lsat_1_v5_gn_4_137721 Lactuca sativa HOM05D004923 ORTHO05D005940 8.4e-08 63.2 258 39.5
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 1.1e-07 62.8 98 39.8
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 3.2e-07 61.2 109 40.4
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 7.1e-07 60.1 75 42.7
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 2.1e-06 58.5 582 29.7
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 7.9e-06 56.6 284 22.9


User provided reference genes

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