Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.2e-158 563.1 293 100.0
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.4e-146 523.1 293 93.2
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.4e-143 513.1 293 91.1
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.5e-127 459.1 297 80.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.5e-127 459.1 297 80.5
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 5.5e-127 458.0 297 80.5
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.6e-126 456.4 297 80.1
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 6.1e-126 454.5 297 79.8
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 1.4e-125 453.4 296 80.1
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 3.0e-125 452.2 294 79.6
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 5.1e-125 451.4 297 79.5
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.1e-124 450.3 297 79.1
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.5e-124 449.9 300 79.3
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 2.0e-124 449.5 297 79.1
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 9.7e-124 447.2 297 78.8
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 1.4e-122 443.4 297 78.8
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 2.0e-121 439.5 297 78.5
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 4.5e-121 438.3 297 77.1
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 7.7e-121 437.6 298 76.5
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 7.7e-121 437.6 299 78.9
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 7.7e-121 437.6 298 77.5
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.0e-120 437.2 298 76.8
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.0e-120 437.2 298 76.8
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 1.3e-120 436.8 298 76.5
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.3e-120 436.8 298 76.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 1.3e-120 436.8 297 77.1
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 1.3e-120 436.8 297 77.8
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.7e-120 436.4 302 78.5
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 2.9e-120 435.6 298 77.9
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.9e-120 435.6 298 76.8
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 3.8e-120 435.3 300 77.3
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.8e-120 435.3 298 76.5
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.8e-120 435.3 298 76.2
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 5.0e-120 434.9 299 77.6
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 1.4e-119 433.3 295 76.9
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 4.2e-119 431.8 299 76.6
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 4.2e-119 431.8 295 76.9
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 6.1e-118 427.9 289 79.6
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 8.0e-118 427.6 298 76.5
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.0e-117 427.2 294 76.9
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.4e-117 426.8 300 75.3
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 3.9e-117 425.2 289 78.9
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.0e-116 422.9 297 75.8
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 2.6e-116 422.5 294 75.5
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 9.7e-116 420.6 298 76.2
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 1.3e-115 420.2 297 75.4
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 3.7e-115 418.7 299 75.6
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 3.7e-115 418.7 298 75.2
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 8.2e-115 417.5 298 74.2
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 1.8e-114 416.4 298 73.8
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 2.4e-114 416.0 315 72.7
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.4e-114 416.0 298 73.5
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 4.1e-114 415.2 297 76.1
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 5.3e-114 414.8 305 74.1
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 9.1e-114 414.1 297 74.7
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.6e-113 413.3 305 73.1
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 2.0e-113 412.9 297 73.7
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 1.3e-112 410.2 293 74.1
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 6.5e-112 407.9 293 74.4
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.9e-111 406.4 293 74.7
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 2.5e-111 406.0 293 74.7
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.2e-111 405.2 298 72.1
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 4.2e-111 405.2 297 75.4
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 5.5e-111 404.8 294 72.1
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 1.2e-110 403.7 297 73.1
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 2.7e-110 402.5 293 72.7
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.0e-109 400.6 294 70.4
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 3.0e-109 399.1 296 71.6
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 4.0e-109 398.7 296 72.3
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 5.2e-109 398.3 294 72.4
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 8.8e-109 397.5 296 73.0
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 8.8e-109 397.5 293 72.0
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.5e-108 396.7 293 72.7
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 2.0e-108 396.4 295 70.8
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 2.0e-108 396.4 302 70.9
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 2.0e-108 396.4 293 72.7
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 4.4e-108 395.2 293 74.1
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 7.5e-108 394.4 293 73.0
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 7.5e-108 394.4 293 73.0
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.3e-107 393.7 299 69.6
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.3e-107 393.7 294 70.1
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 1.7e-107 393.3 293 72.7
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 1.7e-107 393.3 293 72.7
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 1.7e-107 393.3 293 72.7
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 2.8e-107 392.5 297 71.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 3.7e-107 392.1 296 70.9
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.8e-107 391.7 297 72.1
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 8.3e-107 391.0 294 71.1
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.1e-106 390.6 299 71.9
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 7.0e-106 387.9 300 70.7
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 2.0e-105 386.3 252 78.6
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 2.7e-105 386.0 296 70.6
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 3.5e-105 385.6 296 70.9
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 6.5e-104 381.3 297 69.0
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.9e-103 379.8 282 71.6
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 5.5e-103 378.3 299 68.2
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 9.4e-103 377.5 297 67.3
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.4e-101 373.6 254 75.2
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 5.2e-101 371.7 294 69.0
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.2e-100 370.5 236 79.2
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.5e-100 370.2 297 68.0
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 1.7e-99 366.7 283 71.0
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 2.1e-94 349.7 294 67.3
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 8.0e-94 347.8 234 75.6
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.4e-92 342.0 254 72.0
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.3e-88 329.7 226 73.0
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 3.9e-88 328.9 303 63.0
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.3e-87 325.9 268 65.7
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 2.8e-86 322.8 227 70.9
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 2.2e-83 313.2 222 71.6
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.9e-82 310.1 238 67.6
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 2.8e-78 296.2 229 66.8
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 1.9e-74 283.5 226 64.2
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 7.8e-73 278.1 215 72.1
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.0e-72 277.7 203 67.5
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 8.9e-61 238.0 137 84.7
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.9e-55 220.3 140 75.0
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 3.9e-48 196.1 225 44.0
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 9.6e-47 191.4 205 45.9
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 3.5e-41 172.9 218 42.2
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 2.6e-36 156.8 86 90.7
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 1.4e-34 151.0 95 83.2
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.0e-32 144.8 83 88.0
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 5.5e-26 122.5 64 87.5
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 5.5e-10 69.3 88 54.5


User provided reference genes

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