Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G038250 Populus trichocarpa HOM05D009049 ORTHO05D011172 1.5e-23 114.4 54 100.0
Potri.005G038350 Populus trichocarpa HOM05D009049 ORTHO05D011172 2.0e-20 104.0 54 92.6
Potri.005G038301 Populus trichocarpa HOM05D009049 ORTHO05D011172 4.4e-20 102.8 54 90.7
Potri.005G038600 Populus trichocarpa HOM05D009049 ORTHO05D011172 1.4e-18 97.8 51 92.2
Potri.002G227701 Populus trichocarpa HOM05D009049 ORTHO05D011172 1.2e-14 84.7 54 74.1
Sabra14G0116800 Salix brachista HOM05D009049 ORTHO05D011172 1.6e-14 84.3 53 73.6
Sabra02G0174300 Salix brachista HOM05D009049 ORTHO05D011172 1.3e-11 74.7 56 66.1
Atru.chr6.3208 Acer truncatum HOM05D009049 ORTHO05D011172 2.2e-11 73.9 56 67.9
Haze_12848 Corylus avellana HOM05D009049 ORTHO05D011172 3.7e-11 73.2 52 73.1
Haze_12847 Corylus avellana HOM05D009049 ORTHO05D011172 1.8e-10 70.9 51 76.5
Sabra02G0174400 Salix brachista HOM05D009049 ORTHO05D011172 2.4e-10 70.5 56 64.3
Dinv05417 Davidia involucrata HOM05D009049 ORTHO05D011172 4.1e-10 69.7 49 71.4
CiPaw.03G158900 Carya illinoinensis HOM05D009049 ORTHO05D011172 1.6e-09 67.8 51 64.7
CiPaw.04G114800 Carya illinoinensis HOM05D009049 ORTHO05D011172 1.6e-09 67.8 51 72.5
Nitab4.5_0001601g0050 Nicotiana tabacum HOM05D011765 ORTHO05D014158 2.7e-09 67.0 55 63.6
Cpa.g.sc87.92 Carica papaya HOM05D009049 ORTHO05D011172 3.5e-09 66.6 52 61.5
FAN09G4301 Fragaria x ananassa HOM05D009049 ORTHO05D011172 7.8e-09 65.5 52 65.4
Cfa014382 Carpinus fangiana HOM05D009049 ORTHO05D011172 6.6e-08 62.4 39 74.4
FAN05G0945 Fragaria x ananassa HOM05D009049 ORTHO05D011172 6.6e-08 62.4 52 63.5
FAN14G3351 Fragaria x ananassa HOM05D009049 ORTHO05D011172 6.6e-08 62.4 52 63.5
QL08p032698 Quercus lobata HOM05D009049 ORTHO05D011172 1.1e-07 61.6 51 70.6
QL93p2020_0010 Quercus lobata HOM05D009049 ORTHO05D011172 1.1e-07 61.6 51 70.6
MELO3C018822.2 Cucumis melo HOM05D009049 ORTHO05D011172 1.5e-07 61.2 51 66.7
Peaxi162Scf00007g00636 Petunia axillaris HOM05D011765 ORTHO05D014158 1.5e-07 61.2 52 63.5
RcHm_v2.0_Chr2g0158961 Rosa chinensis HOM05D009049 ORTHO05D011172 1.9e-07 60.8 50 64.0
Sed0020588 Sechium edule HOM05D009049 ORTHO05D011172 2.5e-07 60.5 50 66.0
PGSC0003DMG401028957 Solanum tuberosum HOM05D011765 ORTHO05D014158 4.3e-07 59.7 52 63.5
PGSC0003DMG402028957 Solanum tuberosum HOM05D011765 ORTHO05D014158 4.3e-07 59.7 52 63.5
TWI36G0814 Tripterygium wilfordii HOM05D009049 ORTHO05D011172 4.3e-07 59.7 62 54.8
CsaV3_7G003520 Cucumis sativus L. HOM05D009049 ORTHO05D011172 5.6e-07 59.3 50 66.0
Cfa014384 Carpinus fangiana HOM05D009049 ORTHO05D011172 7.3e-07 58.9 35 85.7
CAN.G198.30 Capsicum annuum HOM05D011765 ORTHO05D014158 2.1e-06 57.4 52 57.7
PGSC0003DMG400028956 Solanum tuberosum HOM05D011765 ORTHO05D014158 2.8e-06 57.0 52 61.5
PGR042G2010 Punica granatum HOM05D009049 ORTHO05D011172 3.6e-06 56.6 52 57.7
CAN.G198.28 Capsicum annuum HOM05D011765 ORTHO05D014158 8.0e-06 55.5 52 55.8


User provided reference genes

Program Settings