Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 8.6e-159 563.5 272 100.0
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 2.7e-136 488.8 300 81.3
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 9.0e-108 394.0 280 68.6
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 3.6e-104 382.1 271 66.1
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 8.8e-103 377.5 266 66.2
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 2.0e-102 376.3 271 64.9
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 1.7e-101 373.2 269 65.8
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 6.3e-101 371.3 271 65.3
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 8.2e-101 370.9 261 65.5
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 6.9e-100 367.9 267 63.7
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 6.5e-98 361.3 271 62.4
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 4.2e-97 358.6 267 62.2
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 1.2e-96 357.1 259 64.1
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 1.6e-96 356.7 272 61.4
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 2.7e-96 355.9 273 62.3
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.7e-96 355.9 272 63.6
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 3.6e-96 355.5 267 63.3
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 3.6e-96 355.5 271 63.5
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 2.3e-95 352.8 263 63.5
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.0e-95 352.4 271 63.1
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 2.0e-94 349.7 258 60.1
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.6e-94 349.4 266 62.8
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 2.6e-94 349.4 273 60.4
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 2.6e-94 349.4 251 63.7
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 3.3e-94 349.0 269 59.5
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.3e-94 349.0 266 62.8
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 4.4e-94 348.6 269 60.2
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 7.4e-94 347.8 272 61.8
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 2.2e-93 346.3 265 61.1
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 6.3e-93 344.7 273 60.4
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 8.2e-93 344.4 257 61.9
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 1.1e-92 344.0 268 59.0
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 1.1e-92 344.0 254 63.4
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 1.8e-92 343.2 265 60.0
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 2.4e-92 342.8 269 60.6
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 4.1e-92 342.0 263 59.7
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 4.1e-92 342.0 257 61.9
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 5.3e-92 341.7 271 59.8
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 1.2e-91 340.5 256 60.2
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 1.6e-91 340.1 265 59.2
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 1.6e-91 340.1 254 61.4
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 3.5e-91 339.0 254 59.4
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 7.7e-91 337.8 266 59.4
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 1.7e-90 336.7 273 59.7
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 2.9e-90 335.9 269 56.9
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 2.9e-90 335.9 280 60.0
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 1.1e-89 334.0 277 57.8
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 5.5e-89 331.6 277 57.4
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 1.2e-88 330.5 247 63.6
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 2.1e-88 329.7 264 58.3
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 2.7e-88 329.3 249 59.8
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 3.6e-88 328.9 258 59.3
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 4.7e-88 328.6 259 58.7
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 1.1e-86 323.9 275 56.0
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 7.5e-86 321.2 262 57.3
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 1.7e-85 320.1 263 57.8
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 2.2e-85 319.7 261 57.1
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 3.7e-85 318.9 262 56.9
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 6.3e-85 318.2 266 57.5
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 8.2e-85 317.8 262 56.5
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 8.2e-85 317.8 282 53.5
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 1.1e-84 317.4 263 57.4
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 3.1e-84 315.8 237 63.3
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 4.1e-84 315.5 255 59.2
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 9.1e-84 314.3 258 53.9
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 9.1e-84 314.3 257 59.1
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 2.7e-83 312.8 263 57.0
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 3.5e-83 312.4 263 56.7
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 4.5e-83 312.0 262 55.0
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 3.8e-82 308.9 233 63.1
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 6.5e-82 308.1 232 61.2
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 6.5e-82 308.1 270 55.9
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.9e-81 306.6 256 56.6
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 5.5e-81 305.1 265 52.8
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 9.4e-81 304.3 257 54.1
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 3.6e-80 302.4 264 56.4
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 8.0e-80 301.2 259 57.5
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 8.0e-80 301.2 283 52.3
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 5.2e-79 298.5 262 54.2
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 6.8e-79 298.1 263 54.8
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 2.0e-78 296.6 258 51.9
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 3.4e-78 295.8 237 60.8
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 4.4e-78 295.4 244 58.6
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 9.8e-78 294.3 238 56.3
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 2.8e-77 292.7 237 59.9
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 4.8e-77 292.0 238 59.7
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 4.1e-76 288.9 229 62.0
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 9.1e-76 287.7 237 59.5
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 1.6e-75 287.0 255 52.2
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.0e-75 286.6 231 61.5
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 4.5e-75 285.4 287 49.1
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 1.7e-69 266.9 261 52.1
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 8.3e-69 264.6 240 53.3
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 1.8e-68 263.5 248 50.4
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 3.5e-67 259.2 211 54.5
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 5.2e-63 245.4 180 62.2
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 2.4e-60 236.5 161 64.6
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 4.1e-60 235.7 239 46.9
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 5.6e-57 225.3 219 49.8
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 5.2e-55 218.8 208 51.4
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 4.9e-53 212.2 210 48.1
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 3.2e-52 209.5 255 40.8
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 1.7e-50 203.8 176 57.4
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 3.1e-47 193.0 256 43.0
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 1.5e-41 174.1 213 46.0
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 5.6e-41 172.2 211 40.8
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.1e-40 170.2 173 50.9
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 1.2e-38 164.5 133 58.6
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 2.6e-38 163.3 218 40.8
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 8.4e-37 158.3 237 40.9
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 3.2e-36 156.4 239 40.6
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 3.0e-34 149.8 230 36.5
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 2.4e-31 140.2 220 37.7
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 8.9e-31 138.3 97 63.9
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 2.4e-28 130.2 141 45.4
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 3.2e-28 129.8 115 55.7
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 1.6e-27 127.5 238 31.5
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 1.5e-25 120.9 127 52.8
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 1.1e-20 104.8 102 53.9
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.4e-20 104.4 104 54.8
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 3.2e-20 103.2 96 55.2
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.8e-16 90.1 90 53.3
Cre03.g200651 Chlamydomonas reinhardtii HOM05D006625 ORTHO05D008060 6.9e-15 85.5 319 24.8
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 6.9e-15 85.5 59 61.0
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 3.5e-11 73.2 66 54.5
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 4.3e-09 66.2 107 36.4


User provided reference genes

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