Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G030626 Populus trichocarpa HOM05D000021 ORTHO05D000010 7.7e-88 327.8 263 100.0
Potri.005G030800 Populus trichocarpa HOM05D000021 ORTHO05D000010 4.9e-50 202.2 230 88.3
Potri.005G031700 Populus trichocarpa HOM05D000021 ORTHO05D000010 2.7e-48 196.4 230 87.4
Potri.005G031300 Populus trichocarpa HOM05D000021 ORTHO05D000010 1.2e-45 187.6 230 61.3
Potri.013G020900 Populus trichocarpa HOM05D000021 ORTHO05D000010 3.4e-35 152.9 113 72.6
TAR365G0462 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.5e-22 110.9 232 69.4
CSS0037055 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.7e-18 97.4 109 49.5
GSVIVG01000058001 Vitis vinifera HOM05D000052 ORTHO05D000046 6.4e-18 95.5 115 47.8
Nn4g26262 Nelumbo nucifera HOM05D000021 ORTHO05D000010 8.7e-15 85.1 113 43.4
PGR004G0780 Punica granatum HOM05D000021 ORTHO05D000010 5.6e-14 82.4 231 63.2
CANSAT54G1176 Cannabis sativa HOM05D000021 ORTHO05D000010 2.8e-13 80.1 232 62.5
CiPaw.08G164700 Carya illinoinensis HOM05D000021 ORTHO05D000010 4.8e-13 79.3 108 45.4
Prupe.6G325600 Prunus persica HOM05D000021 ORTHO05D000010 2.4e-12 77.0 118 40.7
FAN05G1582 Fragaria x ananassa HOM05D000021 ORTHO05D000010 9.9e-11 71.6 113 43.4
FAN02G3206 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.2e-10 70.5 113 43.4
FAN09G4350 Fragaria x ananassa HOM05D000001 ORTHO05D005950 2.9e-10 70.1 114 43.0
FvH4_6g05850 Fragaria vesca HOM05D000001 ORTHO05D009582 3.8e-10 69.7 113 41.6
FAN05G2865 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.2e-09 66.6 113 42.5
FAN14G1084 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.6e-08 64.3 114 38.6
FAN14G4156 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.6e-08 64.3 114 38.6
C01p49820 Brassica napus HOM05D000021 ORTHO05D000010 3.5e-08 63.2 109 37.6
BolC1t04940H Brassica oleracea HOM05D000021 ORTHO05D000010 3.5e-08 63.2 109 37.6
RcHm_v2.0_Chr3g0454791 Rosa chinensis HOM05D000021 ORTHO05D000010 3.5e-08 63.2 115 39.1
CAN.G1635.24 Capsicum annuum HOM05D000021 ORTHO05D000010 4.6e-08 62.8 112 37.5
CAN.G1909.10 Capsicum annuum HOM05D000021 ORTHO05D000010 6.0e-08 62.4 112 36.6
Manes.10G016000 Manihot esculenta HOM05D000021 ORTHO05D000010 1.3e-07 61.2 245 55.9
TAR402G0005 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.3e-07 61.2 115 38.3
GSVIVG01000055001 Vitis vinifera HOM05D000021 ORTHO05D000010 1.8e-07 60.8 93 40.9
Os06g0185966 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 2.3e-07 60.5 246 46.3
BcaC09g48434 Brassica carinata HOM05D000021 ORTHO05D000010 3.0e-07 60.1 109 36.7
AUR62016687 Chenopodium quinoa HOM05D000021 ORTHO05D000010 3.0e-07 60.1 110 38.2
CAN.G875.6 Capsicum annuum HOM05D000021 ORTHO05D000010 3.9e-07 59.7 109 37.6
MELO3C002667.2 Cucumis melo HOM05D000021 ORTHO05D000010 3.9e-07 59.7 112 32.1
Manes.10G015715 Manihot esculenta HOM05D000021 ORTHO05D000010 3.9e-07 59.7 245 53.1
Manes.10G015742 Manihot esculenta HOM05D000021 ORTHO05D000010 3.9e-07 59.7 245 53.9
Manes.10G015800 Manihot esculenta HOM05D000021 ORTHO05D000010 3.9e-07 59.7 245 53.9
QL10p043140 Quercus lobata HOM05D000021 ORTHO05D000010 6.7e-07 58.9 113 35.4
ECA236G4334 Erigeron canadensis HOM05D000021 ORTHO05D000010 8.7e-07 58.5 111 33.3
Aa31LG4G14480 Aethionema arabicum HOM05D000021 ORTHO05D000010 1.1e-06 58.2 114 30.7
Dinv30711 Davidia involucrata HOM05D000021 ORTHO05D000010 1.5e-06 57.8 116 34.5
TAR633G2674 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.5e-06 57.8 119 34.5
Manes.10G134903 Manihot esculenta HOM05D000021 ORTHO05D000010 1.9e-06 57.4 116 37.9
RcHm_v2.0_Chr5g0059131 Rosa chinensis HOM05D000021 ORTHO05D000010 1.9e-06 57.4 113 33.6
ClCG01G024390 Citrullus lanatus HOM05D000021 ORTHO05D000010 2.5e-06 57.0 120 34.2
Thecc.07G128800 Theobroma cacao HOM05D000021 ORTHO05D000010 3.3e-06 56.6 110 35.5
ECA232G3657 Erigeron canadensis HOM05D000021 ORTHO05D000010 4.3e-06 56.2 111 31.5
CANSAT35G1645 Cannabis sativa HOM05D000021 ORTHO05D000010 5.6e-06 55.8 118 32.2
LjContig00357g0014932 Lotus japonicus HOM05D000021 ORTHO05D000010 5.6e-06 55.8 115 32.2
QL08p061542 Quercus lobata HOM05D000021 ORTHO05D000010 5.6e-06 55.8 265 51.3
Thhalv10010088m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 7.4e-06 55.5 123 35.0
Manes.17G067300 Manihot esculenta HOM05D000021 ORTHO05D000010 7.4e-06 55.5 115 33.9
Zm00001eb417710 Zea mays HOM05D000021 ORTHO05D000010 7.4e-06 55.5 116 36.2
BraA03t10926Z Brassica rapa HOM05D000021 ORTHO05D000010 9.6e-06 55.1 110 30.9
Manes.07G016700 Manihot esculenta HOM05D000021 ORTHO05D000010 9.6e-06 55.1 106 34.9
Nitab4.5_0002458g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 9.6e-06 55.1 113 35.4
Os01g0523100 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 9.6e-06 55.1 114 33.3
TAR623G1773 Trochodendron aralioides HOM05D000021 ORTHO05D000010 9.6e-06 55.1 107 35.5


User provided reference genes

Program Settings