Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G023100 Populus trichocarpa HOM05D014310 ORTHO05D030505 7.4e-181 637.1 329 100.0
Potri.005G023201 Populus trichocarpa HOM05D014310 ORTHO05D030505 2.8e-180 635.2 329 99.7
Potri.005G023050 Populus trichocarpa HOM05D014310 ORTHO05D030505 9.4e-168 593.6 329 94.2
Sabra05G0029100 Salix brachista HOM05D014310 ORTHO05D030505 4.1e-123 445.3 329 70.2
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 7.5e-24 115.5 177 41.8
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 1.0e-20 105.1 170 37.1
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 3.0e-20 103.6 170 36.5
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.6e-18 97.8 166 38.6
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 1.6e-18 97.8 147 36.7
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 4.7e-18 96.3 149 36.9
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.2e-16 91.7 149 38.3
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 4.4e-16 89.7 140 37.1
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 4.4e-16 89.7 150 36.0
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.9e-15 87.0 147 36.1
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.4e-14 84.7 146 35.6
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.9e-14 84.3 148 34.5
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 5.4e-14 82.8 148 33.8
Cfa006653 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.3e-12 78.2 155 31.6
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.7e-12 77.8 146 32.2
Rhsim05G0137100 Rhododendron simsii HOM05D003556 ORTHO05D003404 1.1e-11 75.1 147 33.3
Cfa014665 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.9e-11 74.3 171 33.3
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 1.9e-11 74.3 148 31.8
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 3.3e-11 73.6 146 32.2
Cfa014668 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.3e-11 73.6 171 32.7
Actinidia25936 Actinidia chinensis HOM05D001445 ORTHO05D001261 4.3e-11 73.2 272 23.9
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 4.3e-11 73.2 155 32.3
Manes.09G171725 Manihot esculenta HOM05D020154 ORTHO05D003404 5.6e-11 72.8 147 32.0
Manes.09G172850 Manihot esculenta HOM05D020154 ORTHO05D003404 7.3e-11 72.4 147 31.3
Manes.09G173066 Manihot esculenta HOM05D020154 ORTHO05D003404 7.3e-11 72.4 147 31.3
Manes.09G173282 Manihot esculenta HOM05D020154 ORTHO05D003404 7.3e-11 72.4 147 31.3
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 7.3e-11 72.4 148 32.4
CiPaw.08G093400 Carya illinoinensis HOM05D003556 ORTHO05D003404 9.5e-11 72.0 160 28.1
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.2e-10 71.6 148 30.4
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 2.8e-10 70.5 148 31.8
CiPaw.08G160100 Carya illinoinensis HOM05D014310 ORTHO05D003404 3.6e-10 70.1 155 33.5
CDE07G1929 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 4.7e-10 69.7 113 35.4
Haze_04119 Corylus avellana HOM05D014310 ORTHO05D003404 4.7e-10 69.7 142 33.8
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 6.2e-10 69.3 124 30.6
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.4e-09 68.2 357 24.6
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.8e-09 67.8 154 29.2
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.8e-09 67.8 154 29.2
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.8e-09 67.8 155 31.6
CiPaw.08G159900 Carya illinoinensis HOM05D014310 ORTHO05D003404 1.8e-09 67.8 155 32.9
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 3.1e-09 67.0 122 34.4
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 5.2e-09 66.2 149 30.9
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 8.9e-09 65.5 110 35.5
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.5e-08 64.7 132 30.3
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 9.9e-08 62.0 148 32.4
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.3e-07 61.6 162 25.3
Rhsim11G0009400 Rhododendron simsii HOM05D001445 ORTHO05D001261 1.3e-07 61.6 154 27.3
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 2.2e-07 60.8 150 27.3
CiPaw.08G159700 Carya illinoinensis HOM05D014310 ORTHO05D003404 2.2e-07 60.8 158 29.7
Potri.003G086600 Populus trichocarpa HOM05D001445 ORTHO05D001261 2.2e-07 60.8 145 28.3
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 3.7e-07 60.1 166 31.3
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 4.9e-07 59.7 173 29.5
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 1.1e-06 58.5 152 30.3
CiPaw.08G159800 Carya illinoinensis HOM05D014310 ORTHO05D003404 1.1e-06 58.5 155 30.3
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 1.1e-06 58.5 154 27.9
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 1.1e-06 58.5 166 27.1
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 1.1e-06 58.5 123 30.1
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.1e-06 58.5 157 30.6
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.4e-06 58.2 152 27.6
CDE06G1635 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.9e-06 57.8 91 34.1
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 2.4e-06 57.4 122 29.5
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 2.4e-06 57.4 158 26.6
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 2.4e-06 57.4 121 31.4
CiPaw.11G087100 Carya illinoinensis HOM05D001445 ORTHO05D001261 3.2e-06 57.0 180 25.6
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 4.1e-06 56.6 115 31.3
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 4.1e-06 56.6 160 31.2
CiPaw.07G023600 Carya illinoinensis HOM05D003556 ORTHO05D003404 5.4e-06 56.2 177 30.5
Nn4g25762 Nelumbo nucifera HOM05D003556 ORTHO05D003404 5.4e-06 56.2 149 30.2
TWI14G0192 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 5.4e-06 56.2 129 31.8
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 7.1e-06 55.8 127 29.9
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 7.1e-06 55.8 183 29.0
Haze_14538 Corylus avellana HOM05D030505 ORTHO05D003404 9.2e-06 55.5 213 25.8
MELO3C003367.2 Cucumis melo HOM05D001445 ORTHO05D001261 9.2e-06 55.5 173 25.4
Duzib138G0838 Durio zibethinus HOM05D003556 ORTHO05D003404 9.2e-06 55.5 144 29.2
Eucgr.D01179 Eucalyptus grandis HOM05D001445 ORTHO05D001261 9.2e-06 55.5 144 27.1


User provided reference genes

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