Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G023050 Populus trichocarpa HOM05D014310 ORTHO05D030505 5.7e-173 610.9 329 100.0
Potri.005G023100 Populus trichocarpa HOM05D014310 ORTHO05D030505 5.5e-168 594.3 329 94.2
Potri.005G023201 Populus trichocarpa HOM05D014310 ORTHO05D030505 2.1e-167 592.4 329 93.9
Sabra05G0029100 Salix brachista HOM05D014310 ORTHO05D030505 6.2e-119 431.4 329 68.4
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 6.8e-25 119.0 177 41.8
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 4.9e-23 112.8 170 38.2
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 5.4e-22 109.4 170 37.1
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 7.8e-21 105.5 147 38.1
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.7e-20 104.4 148 40.5
Haze_04119 Corylus avellana HOM05D014310 ORTHO05D003404 3.0e-20 103.6 270 30.7
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 2.5e-19 100.5 149 36.9
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 8.0e-18 95.5 149 38.3
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 1.4e-17 94.7 150 36.7
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 3.1e-17 93.6 140 37.1
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 6.8e-17 92.4 147 36.7
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 5.8e-16 89.4 150 34.0
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.7e-15 87.8 150 33.3
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 2.4e-14 84.0 146 32.9
Cfa006653 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.4e-14 84.0 155 32.3
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 1.2e-13 81.6 146 32.9
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 2.1e-13 80.9 148 32.4
Rhsim05G0137100 Rhododendron simsii HOM05D003556 ORTHO05D003404 6.0e-13 79.3 147 34.0
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.0e-12 78.6 148 31.1
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 1.0e-12 78.6 148 33.1
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 3.9e-12 76.6 155 32.3
Cfa014665 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.9e-12 76.6 151 33.1
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 3.9e-12 76.6 148 32.4
CiPaw.08G093400 Carya illinoinensis HOM05D003556 ORTHO05D003404 5.1e-12 76.3 151 29.1
Cfa014668 Carpinus fangiana HOM05D003556 ORTHO05D003404 6.6e-12 75.9 151 32.5
CiPaw.08G160100 Carya illinoinensis HOM05D014310 ORTHO05D003404 6.6e-12 75.9 155 33.5
CDE07G1929 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.1e-11 75.1 113 35.4
Manes.09G171725 Manihot esculenta HOM05D020154 ORTHO05D003404 1.1e-11 75.1 147 33.3
Manes.09G172850 Manihot esculenta HOM05D020154 ORTHO05D003404 1.5e-11 74.7 147 32.7
Manes.09G173066 Manihot esculenta HOM05D020154 ORTHO05D003404 1.5e-11 74.7 147 32.7
Manes.09G173282 Manihot esculenta HOM05D020154 ORTHO05D003404 1.5e-11 74.7 147 32.7
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.5e-11 73.9 155 32.3
CiPaw.08G159900 Carya illinoinensis HOM05D014310 ORTHO05D003404 3.3e-11 73.6 155 32.9
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 7.3e-11 72.4 149 31.5
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 7.3e-11 72.4 149 31.5
CiPaw.07G023500 Carya illinoinensis HOM05D003556 ORTHO05D003404 7.3e-11 72.4 151 35.1
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.6e-10 71.2 149 30.9
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 2.8e-10 70.5 149 30.9
CiPaw.08G159700 Carya illinoinensis HOM05D014310 ORTHO05D003404 6.2e-10 69.3 157 31.2
QL03p019019 Quercus lobata HOM05D003556 ORTHO05D003404 8.1e-10 68.9 149 31.5
QL03p019550 Quercus lobata HOM05D003556 ORTHO05D003404 8.1e-10 68.9 149 32.2
QL03p019667 Quercus lobata HOM05D003556 ORTHO05D003404 8.1e-10 68.9 149 31.5
QL03p019662 Quercus lobata HOM05D003556 ORTHO05D003404 1.1e-09 68.6 149 31.5
QL08p042930 Quercus lobata HOM05D003556 ORTHO05D003404 1.1e-09 68.6 149 31.5
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 4.0e-09 66.6 173 30.1
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 4.0e-09 66.6 169 28.4
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 5.2e-09 66.2 166 31.9
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 8.9e-09 65.5 130 33.1
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 8.9e-09 65.5 187 32.6
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 1.5e-08 64.7 152 30.9
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.5e-08 64.7 152 28.3
TWI14G0192 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.0e-08 64.3 187 29.4
CiPaw.08G159800 Carya illinoinensis HOM05D014310 ORTHO05D003404 2.6e-08 63.9 155 30.3
CDE06G1635 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 2.6e-08 63.9 91 35.2
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 2.6e-08 63.9 166 27.7
Rhsim11G0009400 Rhododendron simsii HOM05D001445 ORTHO05D001261 3.4e-08 63.5 154 27.3
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 4.4e-08 63.2 158 27.2
Actinidia25936 Actinidia chinensis HOM05D001445 ORTHO05D001261 5.8e-08 62.8 260 22.3
CiPaw.07G023600 Carya illinoinensis HOM05D003556 ORTHO05D003404 5.8e-08 62.8 152 30.9
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 5.8e-08 62.8 162 24.7
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 9.9e-08 62.0 150 26.7
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 9.9e-08 62.0 183 29.5
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 1.7e-07 61.2 142 28.9
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 4.9e-07 59.7 109 34.9
Ca_22038_v3 Cicer arietinum L. HOM05D001445 ORTHO05D001261 8.3e-07 58.9 180 28.3
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 8.3e-07 58.9 97 36.1
Ciclev10023798m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.9e-06 57.8 173 26.0
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.9e-06 57.8 119 30.3
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 1.9e-06 57.8 165 27.9
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 2.4e-06 57.4 160 30.6
Rhsim13G0008900 Rhododendron simsii HOM05D003556 ORTHO05D003404 2.4e-06 57.4 149 26.8
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 3.2e-06 57.0 151 27.2
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 3.2e-06 57.0 155 27.1
Dinv33067 Davidia involucrata HOM05D003556 ORTHO05D003404 4.1e-06 56.6 200 25.0
Cpa.g.sc151.17 Carica papaya HOM05D003556 ORTHO05D003404 7.1e-06 55.8 144 27.8
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 9.2e-06 55.5 106 33.0
Eucgr.D01179 Eucalyptus grandis HOM05D001445 ORTHO05D001261 9.2e-06 55.5 121 30.6


User provided reference genes

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