Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 2.2e-129 465.7 246 100.0
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 7.7e-106 387.5 242 83.5
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 9.4e-72 274.2 270 60.4
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 1.0e-62 244.2 270 55.9
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 2.5e-24 116.7 255 37.3
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 3.0e-17 93.2 239 36.0
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 5.1e-17 92.4 282 32.6
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 1.6e-15 87.4 263 34.2
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 9.9e-13 78.2 82 56.1
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 1.3e-12 77.8 107 38.3
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 1.7e-12 77.4 46 73.9
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 7.1e-11 72.0 91 44.0
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.2e-10 71.2 59 55.9
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 2.1e-10 70.5 35 85.7
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 2.7e-10 70.1 51 68.6
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 2.7e-10 70.1 51 68.6
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.5e-10 69.7 35 80.0
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.5e-10 69.7 35 80.0
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 3.5e-10 69.7 136 42.6
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.0e-09 68.2 62 56.5
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 2.3e-09 67.0 34 85.3
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 2.3e-09 67.0 43 69.8
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 2.3e-09 67.0 43 69.8
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 6.7e-09 65.5 117 42.7
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 6.7e-09 65.5 86 47.7
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 6.7e-09 65.5 83 47.0
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 1.1e-08 64.7 120 35.8
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 1.5e-08 64.3 59 50.8
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 1.9e-08 63.9 140 36.4
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 3.3e-08 63.2 43 67.4
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 4.3e-08 62.8 34 79.4
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 4.3e-08 62.8 34 79.4
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 4.3e-08 62.8 34 79.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 5.6e-08 62.4 89 38.2
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 9.6e-08 61.6 94 41.5
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 1.3e-07 61.2 34 79.4
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 2.8e-07 60.1 34 76.5
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 1.1e-06 58.2 102 41.2
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 1.1e-06 58.2 102 41.2
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 1.1e-06 58.2 102 41.2
AUR62005244 Chenopodium quinoa HOM05D031177 ORTHO05D026471 1.1e-06 58.2 82 41.5
FvH4_6g07020 Fragaria vesca HOM05D023588 ORTHO05D025400 3.1e-06 56.6 136 34.6
FAN14G1661 Fragaria x ananassa HOM05D023588 ORTHO05D025400 3.1e-06 56.6 136 34.6


User provided reference genes

Program Settings