Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G006200 Populus trichocarpa HOM05D014622 ORTHO05D009202 4.7e-48 194.5 122 100.0
Potri.005G006000 Populus trichocarpa HOM05D014622 ORTHO05D009202 9.2e-44 180.3 123 94.3
Potri.013G005300 Populus trichocarpa HOM05D014622 ORTHO05D009202 3.1e-31 138.7 122 71.3
Sabra05G0002100 Salix brachista HOM05D014622 ORTHO05D009202 2.6e-22 109.0 86 70.9
Sabra11G0072700 Salix brachista HOM05D014622 ORTHO05D009202 2.6e-22 109.0 90 72.2
Sabra11G0078400 Salix brachista HOM05D014622 ORTHO05D009202 2.9e-21 105.5 90 71.1
Sabra05G0016400 Salix brachista HOM05D014622 ORTHO05D009202 5.4e-20 101.3 87 66.7
FAN02G1552 Fragaria x ananassa HOM05D009264 ORTHO05D009202 3.4e-14 82.0 122 49.2
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 1.3e-13 80.1 127 40.9
Sabra13G0004300 Salix brachista HOM05D014622 ORTHO05D009202 2.2e-13 79.3 75 62.7
FvH4_6g08100 Fragaria vesca HOM05D009264 ORTHO05D009202 8.4e-13 77.4 123 44.7
FAN09G1104 Fragaria x ananassa HOM05D009264 ORTHO05D009202 8.4e-13 77.4 122 45.9
FAN14G2966 Fragaria x ananassa HOM05D009264 ORTHO05D009202 8.4e-13 77.4 123 44.7
Sabra11G0072900 Salix brachista HOM05D014622 ORTHO05D009202 3.2e-12 75.5 71 63.4
FAN05G0864 Fragaria x ananassa HOM05D009264 ORTHO05D009202 7.1e-12 74.3 94 44.7
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 3.5e-11 72.0 131 46.6
Thecc.05G327000 Theobroma cacao HOM05D021022 ORTHO05D009202 7.9e-11 70.9 98 45.9
Cfa006734 Carpinus fangiana HOM05D009264 ORTHO05D009202 6.7e-10 67.8 106 43.4
Duzib128G1262 Durio zibethinus HOM05D021022 ORTHO05D009202 2.5e-09 65.9 97 45.4
Manes.08G109000 Manihot esculenta HOM05D009264 ORTHO05D009202 7.4e-09 64.3 128 51.6
CiPaw.07G033300 Carya illinoinensis HOM05D009264 ORTHO05D009202 9.6e-09 63.9 132 49.2
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 2.8e-08 62.4 108 38.0
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 3.7e-08 62.0 100 45.0
CSS0022072 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 6.2e-08 61.2 123 39.8
CSS0039740 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 1.4e-07 60.1 124 42.7
Haze_04025 Corylus avellana HOM05D009264 ORTHO05D009202 2.4e-07 59.3 113 48.7
Prupe.6G307700 Prunus persica HOM05D009264 ORTHO05D009202 9.0e-07 57.4 64 51.6
Manes.09G179600 Manihot esculenta HOM05D009264 ORTHO05D009202 1.2e-06 57.0 95 45.3
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.5e-06 56.6 94 38.3
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 3.4e-06 55.5 86 41.9
RcHm_v2.0_Chr3g0457921 Rosa chinensis HOM05D009264 ORTHO05D009202 4.5e-06 55.1 144 38.9
Hma1.2p1_0052F.1_g030560 Hydrangea macrophylla HOM05D009264 ORTHO05D009202 7.6e-06 54.3 150 37.3
QL03p008780 Quercus lobata HOM05D009264 ORTHO05D009202 1.0e-05 53.9 78 38.5
QL03p013046 Quercus lobata HOM05D009264 ORTHO05D009202 1.0e-05 53.9 78 38.5


User provided reference genes

Program Settings