Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 2.1e-152 542.3 276 100.0
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 7.0e-132 474.2 274 88.7
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 7.3e-89 331.3 275 63.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 9.9e-86 320.9 275 62.5
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.5e-83 312.4 273 60.4
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 5.1e-82 308.5 275 60.7
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 8.7e-82 307.8 275 60.0
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.5e-81 307.0 275 60.4
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.5e-81 307.0 275 62.2
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.6e-80 303.5 273 60.1
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 2.1e-80 303.1 280 60.0
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.4e-79 299.7 276 60.1
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.2e-77 293.1 257 60.7
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.4e-77 291.2 271 57.9
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.1e-76 290.8 256 61.3
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.4e-76 290.4 273 57.5
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.4e-76 290.4 276 57.6
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.9e-76 290.0 273 57.1
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.9e-76 290.0 268 60.1
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.2e-76 289.3 277 57.0
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.1e-76 288.1 273 57.1
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.3e-76 287.7 273 57.5
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 5.1e-74 282.0 271 59.4
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 5.1e-74 282.0 264 61.4
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.9e-73 280.0 273 56.8
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 5.6e-73 278.5 275 55.3
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.8e-71 273.5 278 55.8
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.5e-70 270.4 274 55.1
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 2.2e-69 266.5 268 55.2
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 4.9e-69 265.4 273 56.0
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 9.3e-68 261.2 274 57.3
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.8e-66 256.9 271 53.1
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 3.9e-66 255.8 273 57.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 5.1e-66 255.4 227 62.1
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 3.3e-65 252.7 274 50.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 5.6e-65 251.9 273 53.1
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 8.1e-64 248.1 275 52.0
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.1e-63 247.7 274 49.3
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 9.0e-63 244.6 273 55.7
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.5e-62 243.8 273 55.7
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 2.2e-61 240.0 276 49.6
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.1e-60 237.7 266 51.5
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.6e-59 233.8 280 50.7
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.6e-59 232.3 276 51.4
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 3.0e-58 229.6 283 49.8
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.1e-57 227.6 271 49.4
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.5e-57 227.3 271 49.8
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 4.3e-57 225.7 273 48.0
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.3e-57 225.7 274 52.2
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 5.6e-57 225.3 258 51.6
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 7.4e-57 224.9 279 48.7
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.6e-56 223.8 217 58.1
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.1e-56 223.4 275 50.5
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 8.2e-56 221.5 276 49.6
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-55 220.7 208 58.7
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 4.0e-55 219.2 271 47.2
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 5.3e-55 218.8 205 60.5
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.2e-54 217.6 265 48.7
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 3.4e-54 216.1 273 48.0
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 3.4e-54 216.1 273 46.5
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 4.5e-54 215.7 274 47.4
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.2e-53 213.4 257 50.2
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 2.9e-53 213.0 271 47.6
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.8e-53 212.6 261 50.2
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.4e-52 210.7 276 47.5
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 3.2e-52 209.5 261 49.4
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 2.1e-51 206.8 274 47.4
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 2.1e-51 206.8 273 45.4
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 7.9e-51 204.9 259 50.2
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.8e-50 203.8 273 45.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 5.1e-50 202.2 269 46.5
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 8.7e-50 201.4 269 47.2
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.3e-49 199.5 273 46.9
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 7.4e-49 198.4 266 47.4
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.3e-48 197.6 274 46.4
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.8e-48 195.7 258 48.4
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-47 194.5 276 46.0
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-47 194.5 276 46.0
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.2e-46 191.0 269 45.4
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.5e-46 190.7 263 49.0
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 3.4e-46 189.5 237 51.5
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.6e-43 180.6 255 42.4
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 3.6e-43 179.5 288 40.6
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 6.7e-34 148.7 120 62.5
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.3e-32 144.4 273 39.6
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 1.5e-30 137.5 279 35.8
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 3.5e-30 136.3 274 35.0
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 5.0e-29 132.5 277 33.9
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 4.2e-28 129.4 260 36.2
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 5.5e-28 129.0 260 36.2
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 7.2e-28 128.6 264 35.6
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 9.4e-28 128.3 264 36.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.1e-27 127.1 264 34.8
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.1e-27 127.1 264 34.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.7e-27 126.7 260 36.2
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 4.7e-27 125.9 264 34.5
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.0e-26 124.8 260 35.8
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 3.0e-26 123.2 206 39.8
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 2.0e-25 120.6 135 48.9
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.1e-23 113.2 222 39.2
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 9.1e-23 111.7 269 32.0
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.2e-22 111.3 114 51.8
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.2e-22 111.3 222 38.7
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 2.9e-21 106.7 265 31.7
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 2.5e-20 103.6 93 61.3
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 9.4e-20 101.7 259 31.3
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 6.1e-19 99.0 270 30.4
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 8.0e-19 98.6 105 48.6
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 7.7e-14 82.0 257 27.2
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.5e-12 77.0 193 32.6
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.4e-07 61.2 74 44.6
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 4.1e-07 59.7 53 58.5
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.6e-06 57.8 135 32.6
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.5e-06 56.2 53 60.4
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.5e-06 56.2 53 60.4


User provided reference genes

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