Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.5e-84 316.2 170 100.0
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 8.6e-48 194.1 175 68.0
Sabra01G0170900 Salix brachista HOM05D008094 ORTHO05D010082 8.9e-29 131.0 173 55.5
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 7.1e-26 121.3 168 51.2
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 1.2e-25 120.6 174 51.1
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.0e-24 117.5 183 50.3
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 2.8e-22 109.4 177 45.2
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 3.6e-22 109.0 175 49.1
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 4.7e-22 108.6 188 47.3
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 1.5e-20 103.6 189 45.5
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 3.4e-20 102.4 184 45.1
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 5.8e-20 101.7 201 41.3
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 9.3e-18 94.4 183 43.2
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 3.5e-17 92.4 198 38.9
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 4.6e-17 92.0 160 47.5
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 6.0e-17 91.7 188 41.0
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 2.3e-16 89.7 182 39.0
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 2.3e-16 89.7 199 37.7
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 5.1e-16 88.6 183 42.1
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.1e-15 87.4 184 42.4
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 4.3e-15 85.5 184 39.7
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 4.3e-15 85.5 199 38.2
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 1.6e-14 83.6 184 40.8
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.6e-14 83.6 188 39.9
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 2.8e-14 82.8 188 38.8
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 6.2e-14 81.6 193 38.9
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 1.1e-13 80.9 187 36.4
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 1.1e-13 80.9 189 40.2
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 1.1e-13 80.9 156 44.9
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 2.4e-13 79.7 193 37.3
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 4.0e-13 79.0 185 38.4
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 5.3e-13 78.6 183 37.2
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 2.0e-12 76.6 173 37.6
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 2.6e-12 76.3 187 40.1
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 4.5e-12 75.5 182 39.6
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 5.8e-12 75.1 201 35.8
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 1.3e-11 73.9 102 47.1
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.7e-11 73.6 96 52.1
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 2.9e-11 72.8 181 38.1
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 4.9e-11 72.0 189 36.0
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 8.4e-11 71.2 179 35.8
FAN18G0201 Fragaria x ananassa HOM05D031323 ORTHO05D010082 2.4e-10 69.7 173 38.7
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 3.2e-10 69.3 197 36.0
RcHm_v2.0_Chr7g0220641 Rosa chinensis HOM05D031323 ORTHO05D010082 5.4e-10 68.6 174 40.2
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 9.3e-10 67.8 139 38.8
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 9.3e-10 67.8 199 34.7
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 1.6e-09 67.0 168 37.5
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 2.1e-09 66.6 182 34.6
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 4.6e-09 65.5 199 32.7
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 1.3e-08 63.9 178 32.6
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 2.3e-08 63.2 155 34.8
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 3.9e-08 62.4 78 51.3
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 1.1e-07 60.8 91 49.5
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 1.5e-07 60.5 185 35.1
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 4.3e-07 58.9 203 35.5
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 7.4e-07 58.2 136 39.0
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 7.4e-07 58.2 176 35.8
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 9.6e-07 57.8 185 31.9
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 2.1e-06 56.6 92 48.9
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.1e-06 56.6 92 48.9
Sabra19G0088900 Salix brachista HOM05D008094 ORTHO05D010082 2.8e-06 56.2 171 32.7
Oeu045164.1 Olea europaea HOM05D008094 ORTHO05D010082 3.7e-06 55.8 107 38.3
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 6.2e-06 55.1 124 41.1


User provided reference genes

Program Settings