Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-59 231.1 110 100.0
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 6.2e-31 137.5 103 61.2
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 6.2e-31 137.5 103 61.2
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 1.9e-27 125.9 106 56.6
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.2e-27 123.6 107 54.2
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 1.2e-26 123.2 109 53.2
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 2.7e-26 122.1 107 54.2
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-25 119.0 107 53.3
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 5.1e-25 117.9 91 58.2
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 7.8e-18 94.0 105 45.7
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-16 90.1 102 45.1
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 1.5e-16 89.7 105 42.9
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 3.4e-13 78.6 67 49.3
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-11 73.6 108 39.8
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 1.9e-11 72.8 109 36.7
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-11 71.6 98 40.8
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-11 71.6 109 37.6
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-10 70.1 110 38.2
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-10 70.1 110 36.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-10 69.7 92 41.3
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-10 69.7 95 40.0
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-10 69.3 106 41.5
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.5e-10 68.6 99 37.4
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.5e-10 68.6 110 36.4
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.8e-10 67.4 96 36.5
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.8e-10 67.4 96 36.5
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 1.0e-09 67.0 85 38.8
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-09 67.0 112 34.8
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-09 66.6 110 35.5
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-09 66.6 99 37.4
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-09 66.6 85 37.6
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-09 66.2 110 35.5
Gorai.012G151100 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.3e-09 65.9 86 38.4
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-09 65.5 85 37.6
Duzib052G1144 Durio zibethinus HOM05D002599 ORTHO05D001895 3.9e-09 65.1 83 39.8
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-09 64.7 84 40.5
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-09 64.3 110 34.5
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 8.7e-09 63.9 82 39.0
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.7e-09 63.9 95 36.8
Gohir.A04G121842 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 86 37.2
Gohir.A04G121884 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 81 38.3
Gohir.D04G163166 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 81 38.3
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 63.5 76 34.2
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 1.5e-08 63.2 83 42.2
Gohir.A12G027200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-08 63.2 111 35.1
Potri.003G025350 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.5e-08 63.2 95 37.9
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-08 63.2 96 34.4
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-08 62.8 111 36.0
Gohir.D12G026700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-08 62.8 111 34.2
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-08 62.4 111 32.4
Gohir.D04G163300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-08 62.4 86 37.2
Gorai.012G151200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.5e-08 62.4 81 38.3
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-08 62.0 107 30.8
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-08 62.0 107 34.6
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.3e-08 62.0 107 34.6
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-08 62.0 91 36.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-08 62.0 83 38.6
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 4.3e-08 61.6 106 33.0
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 4.3e-08 61.6 105 34.3
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-08 61.6 109 32.1
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.6e-08 61.2 114 35.1
Gohir.D04G163133 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.6e-08 61.2 79 38.0
Gorai.008G027000 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.6e-08 61.2 99 36.4
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 5.6e-08 61.2 79 39.2
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 5.6e-08 61.2 81 33.3
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 7.3e-08 60.8 81 37.0
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.6e-08 60.5 82 35.4
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-07 60.1 82 39.0
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-07 60.1 82 39.0
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 2.1e-07 59.3 78 39.7
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-07 59.3 111 34.2
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-07 58.9 111 35.1
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-07 58.9 84 36.9
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.8e-07 58.9 108 32.4
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-07 58.5 112 29.5
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 3.6e-07 58.5 105 33.3
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 3.6e-07 58.5 84 36.9
Atru.chr2.65 Acer truncatum HOM05D002599 ORTHO05D001895 4.8e-07 58.2 111 35.1
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.8e-07 58.2 81 37.0
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-07 58.2 107 33.6
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-07 58.2 111 33.3
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 8.1e-07 57.4 89 34.8
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-07 57.4 105 32.4
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-07 57.4 81 35.8
EL10Ac5g12338 Beta vulgaris HOM05D035930 ORTHO05D001895 1.1e-06 57.0 99 32.3
EL10Ac5g12341 Beta vulgaris HOM05D035930 ORTHO05D001895 1.1e-06 57.0 91 34.1
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-06 56.6 80 38.8
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-06 56.6 108 32.4
Dinv31212 Davidia involucrata HOM05D009079 ORTHO05D010907 1.4e-06 56.6 80 32.5
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-06 56.2 82 35.4
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-06 55.8 96 33.3
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.1e-06 55.5 107 33.6
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-06 55.5 108 30.6
Dinv31296 Davidia involucrata HOM05D038556 ORTHO05D010907 4.0e-06 55.1 80 31.2
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-06 55.1 106 34.0
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-06 55.1 107 33.6
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.0e-06 55.1 108 31.5
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 5.3e-06 54.7 88 34.1
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 5.3e-06 54.7 88 34.1
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-06 54.7 75 33.3
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 6.9e-06 54.3 111 31.5


User provided reference genes

Program Settings