Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-58 229.2 111 100.0
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-55 217.6 111 96.4
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 2.3e-41 172.2 110 73.6
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 3.6e-39 164.9 105 77.1
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 6.9e-38 160.6 105 71.4
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 2.6e-37 158.7 105 70.5
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 4.0e-30 134.8 98 64.3
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 2.9e-28 128.6 86 67.4
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.9e-26 120.6 107 54.2
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 5.5e-19 97.8 105 48.6
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 9.3e-19 97.1 105 47.6
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-17 93.2 99 46.5
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-15 85.1 108 39.8
Potri.003G025350 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.8e-14 82.8 84 51.2
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.0e-14 80.5 106 40.6
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.4e-13 78.6 103 41.7
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.5e-13 78.2 103 39.8
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-13 78.2 109 42.2
Gorai.012G151100 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.9e-13 77.8 106 37.7
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.9e-13 77.8 105 38.1
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 1.0e-12 77.0 108 35.2
Gohir.A04G121884 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-12 76.6 106 37.7
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-12 76.6 106 38.7
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-12 76.3 105 37.1
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.2e-12 75.9 112 40.2
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.2e-12 75.9 103 41.7
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 2.2e-12 75.9 67 50.7
Gohir.A04G121842 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-12 75.5 106 37.7
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-12 75.5 105 36.2
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.9e-12 75.5 105 36.2
Duzib052G1144 Durio zibethinus HOM05D002599 ORTHO05D001895 6.5e-12 74.3 106 35.8
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.5e-12 74.3 103 39.8
Gohir.D04G163166 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.5e-12 74.3 106 36.8
Gohir.D04G163300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.5e-12 73.9 114 34.2
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-11 73.2 91 40.7
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-11 73.2 105 37.1
Gorai.012G151200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.9e-11 72.8 106 36.8
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-11 72.8 105 35.2
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.2e-11 72.0 105 35.2
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.2e-11 72.0 105 37.1
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-11 71.6 106 36.8
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.2e-11 70.9 93 39.8
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-10 69.7 102 34.3
Gohir.D04G163133 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-10 69.7 106 34.9
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-10 69.7 105 35.2
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-10 69.7 83 39.8
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-10 69.3 105 34.3
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-10 69.3 94 36.2
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 2.7e-10 68.9 106 32.1
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-10 68.9 88 36.4
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-10 68.6 104 40.4
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-10 68.6 105 34.3
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.6e-10 68.6 102 34.3
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-10 68.6 107 33.6
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-10 68.2 102 34.3
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.6e-10 68.2 106 31.1
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 7.9e-10 67.4 100 38.0
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.9e-10 67.4 105 33.3
Gohir.A12G027200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-09 67.0 114 32.5
Manes.07G021900 Manihot esculenta HOM05D021322 ORTHO05D001895 1.0e-09 67.0 107 36.4
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-09 67.0 106 31.1
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-09 67.0 83 39.8
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-09 66.6 106 32.1
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-09 66.6 102 35.3
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-09 66.6 101 33.7
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 1.8e-09 66.2 110 33.6
Gohir.D12G026700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-09 66.2 114 31.6
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-09 66.2 107 32.7
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-09 65.9 107 35.5
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 2.3e-09 65.9 105 33.3
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 2.3e-09 65.9 105 33.3
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.3e-09 65.9 106 39.6
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.0e-09 65.5 105 33.3
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.0e-09 65.5 104 39.4
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.0e-09 65.5 104 39.4
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-09 65.5 88 37.5
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-09 64.7 106 30.2
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 5.1e-09 64.7 84 38.1
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 6.7e-09 64.3 110 32.7
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.7e-09 64.3 93 36.6
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 6.7e-09 64.3 101 34.7
Gorai.008G027000 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.8e-09 63.9 93 34.4
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 8.8e-09 63.9 106 34.9
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 8.8e-09 63.9 84 38.1
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 90 38.9
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 107 32.7
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 90 38.9
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-08 63.5 90 38.9
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 63.5 86 39.5
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-08 63.2 96 33.3
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-08 63.2 81 35.8
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.9e-08 62.8 81 40.7
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.9e-08 62.8 109 33.0
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.5e-08 62.4 105 33.3
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 2.5e-08 62.4 97 37.1
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-08 62.0 107 32.7
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-08 62.0 105 34.3
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-08 62.0 84 38.1
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-08 62.0 84 38.1
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-08 62.0 90 35.6
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 5.7e-08 61.2 90 33.3
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.7e-08 61.2 107 32.7
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 5.7e-08 61.2 110 31.8
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-08 60.8 104 32.7
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-08 60.8 81 38.3
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.4e-08 60.8 81 38.3
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 7.4e-08 60.8 92 37.0
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 9.7e-08 60.5 107 31.8
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-07 60.1 109 32.1
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-07 59.7 110 33.6
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-07 59.7 89 34.8
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 2.2e-07 59.3 106 36.8
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-07 59.3 109 34.9
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-07 59.3 103 36.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.7e-07 58.5 103 35.9
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.7e-07 58.5 82 37.8
Manes.07G022100 Manihot esculenta HOM05D021322 ORTHO05D001895 3.7e-07 58.5 106 34.0
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.7e-07 58.5 107 31.8
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.8e-07 58.2 104 32.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-07 58.2 83 41.0
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-07 58.2 104 33.7
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 4.8e-07 58.2 80 38.8
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.3e-07 57.8 104 31.7
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.3e-07 57.8 88 35.2
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.3e-07 57.8 88 35.2
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-07 57.4 105 34.3
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 8.2e-07 57.4 107 30.8
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-06 57.0 81 37.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.4e-06 55.8 92 32.6
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 2.4e-06 55.8 113 35.4
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-06 55.5 105 37.1
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 3.1e-06 55.5 105 36.2
EL10Ac5g12338 Beta vulgaris HOM05D035930 ORTHO05D001895 4.1e-06 55.1 98 30.6
Cpa.g.sc48.191 Carica papaya HOM05D007656 ORTHO05D008529 4.1e-06 55.1 104 32.7
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 4.1e-06 55.1 60 40.0
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.3e-06 54.7 86 37.2
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 6.9e-06 54.3 101 27.7
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 6.9e-06 54.3 90 36.7
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-06 54.3 95 36.8
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-06 53.9 107 33.6


User provided reference genes

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