Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 1.1e-129 467.6 475 100.0
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.2e-99 367.9 475 76.4
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 5.5e-52 209.5 499 58.3
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 4.0e-42 176.8 498 46.0
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 2.0e-41 174.5 480 59.4
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 2.6e-41 174.1 488 65.4
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.1e-39 168.7 272 42.3
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.4e-39 167.5 273 43.6
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 7.0e-39 166.0 500 55.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.5e-36 157.5 480 53.3
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.5e-36 157.5 479 56.8
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.3e-36 157.1 310 39.0
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.2e-35 155.2 478 57.1
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 4.7e-35 153.3 289 52.9
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 4.7e-35 153.3 484 53.7
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 8.0e-35 152.5 490 56.1
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.4e-33 147.1 486 50.2
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 7.5e-33 146.0 268 36.9
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 8.3e-32 142.5 506 53.2
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 5.4e-31 139.8 499 53.1
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 4.5e-30 136.7 487 53.0
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.0e-29 135.6 493 54.8
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 1.3e-29 135.2 482 61.8
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 5.0e-29 133.3 490 52.9
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 5.0e-29 133.3 490 54.9
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 5.0e-29 133.3 486 55.6
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.0e-29 133.3 477 53.5
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 3.3e-28 130.6 506 50.4
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 7.3e-28 129.4 305 35.4
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 7.3e-28 129.4 490 50.6
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.2e-27 128.6 479 54.5
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 1.6e-27 128.3 489 58.9
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.6e-27 127.1 289 33.6
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 6.1e-27 126.3 490 48.2
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 1.4e-26 125.2 486 54.3
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.0e-26 124.0 490 44.9
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 4.0e-26 123.6 276 34.4
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 5.2e-26 123.2 487 51.1
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.2e-26 123.2 480 51.0
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 8.9e-26 122.5 494 42.1
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.2e-25 122.1 482 41.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.2e-25 122.1 473 54.3
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 1.5e-25 121.7 477 54.1
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 1.5e-25 121.7 488 48.0
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 5.8e-25 119.8 348 44.5
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 7.5e-25 119.4 554 47.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 2.2e-24 117.9 509 37.1
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 8.3e-24 115.9 490 53.5
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 8.3e-24 115.9 490 46.3
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 8.3e-24 115.9 491 51.1
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 7.0e-23 112.8 282 31.6
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 9.2e-23 112.5 280 31.8
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 9.2e-23 112.5 280 31.8
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 2.0e-22 111.3 531 49.0
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 2.0e-22 111.3 513 48.9
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 3.5e-22 110.5 131 51.1
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 4.6e-22 110.2 517 48.9
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 1.3e-21 108.6 280 31.1
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.7e-21 108.2 483 52.2
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 6.6e-21 106.3 484 52.1
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 6.6e-21 106.3 477 49.9
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 8.6e-21 105.9 477 37.5
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 8.6e-21 105.9 477 53.7
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 1.1e-20 105.5 501 49.1
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.5e-20 105.1 478 50.8
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.5e-20 104.4 516 41.7
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 3.3e-20 104.0 496 50.8
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 4.3e-20 103.6 239 30.5
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 4.3e-20 103.6 483 38.1
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 4.3e-20 103.6 478 43.3
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.1e-19 101.3 343 29.2
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 6.2e-19 99.8 482 44.8
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.3e-18 97.8 478 37.7
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 6.8e-18 96.3 471 49.9
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 7.5e-17 92.8 349 48.4
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 7.5e-17 92.8 279 30.1
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.7e-16 91.7 348 54.6
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 2.9e-16 90.9 482 37.1
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 8.3e-16 89.4 485 42.3
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 1.9e-15 88.2 481 57.6
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 3.5e-14 84.0 500 49.6
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 6.0e-14 83.2 492 50.0
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 7.8e-14 82.8 477 43.4
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.0e-13 82.4 478 45.4
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.3e-13 82.0 69 60.9
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 3.0e-13 80.9 253 31.2
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 1.9e-12 78.2 476 58.0
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.3e-12 77.4 343 64.7
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.3e-12 76.3 280 27.1
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 2.3e-10 71.2 58 51.7
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 1.2e-09 68.9 273 28.6
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 1.5e-09 68.6 272 71.7
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 7.5e-09 66.2 291 68.0
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 6.4e-08 63.2 475 52.2
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 8.3e-08 62.8 48 62.5
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 1.1e-07 62.4 274 74.8
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 1.1e-07 62.4 268 42.5
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.4e-07 62.0 39 74.4
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 7.1e-07 59.7 478 52.3
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 7.1e-07 59.7 477 52.2
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 1.2e-06 58.9 58 53.4
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 1.2e-06 58.9 48 56.2
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 4.6e-06 57.0 189 44.4
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 7.8e-06 56.2 491 47.0


User provided reference genes

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