Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G140701 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.1e-127 459.9 224 100.0
Potri.009G101400 Populus trichocarpa HOM05D003792 ORTHO05D003195 8.3e-83 310.8 228 69.7
Sabra09G0077200 Salix brachista HOM05D003792 ORTHO05D003195 2.2e-75 286.2 230 66.1
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 3.8e-35 152.5 248 39.5
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 7.9e-33 144.8 222 43.7
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 2.7e-25 119.8 227 40.5
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 4.3e-23 112.5 251 37.8
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 5.7e-23 112.1 218 33.0
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 5.7e-23 112.1 245 37.1
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 7.4e-23 111.7 218 33.0
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 9.6e-23 111.3 266 35.0
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 2.1e-22 110.2 242 37.2
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 8.2e-22 108.2 234 37.6
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 1.1e-21 107.8 236 35.2
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.4e-21 106.7 236 34.7
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 5.3e-21 105.5 217 36.4
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.5e-20 104.0 241 35.7
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.0e-20 103.6 211 34.1
Sed0006191 Sechium edule HOM05D003792 ORTHO05D003195 2.6e-20 103.2 217 36.9
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 5.9e-20 102.1 240 37.5
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 5.9e-20 102.1 238 33.6
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.4e-18 97.4 239 33.9
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 1.9e-18 97.1 223 34.1
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 5.5e-18 95.5 244 33.2
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 9.3e-18 94.7 234 33.3
FAN15G2062 Fragaria x ananassa HOM05D025254 ORTHO05D003195 1.6e-17 94.0 233 35.6
FAN20G1193 Fragaria x ananassa HOM05D025254 ORTHO05D003195 1.6e-17 94.0 237 35.0
arahy.Tifrunner.gnm1.ann1.I5Q2RG Arachis hypogaea HOM05D003792 ORTHO05D003195 7.9e-17 91.7 249 32.1
FAN27G2730 Fragaria x ananassa HOM05D025254 ORTHO05D003195 7.9e-17 91.7 238 36.1
FvH4_2g05920 Fragaria vesca HOM05D025254 ORTHO05D003195 8.7e-16 88.2 237 34.6
RcHm_v2.0_Chr6g0257491 Rosa chinensis HOM05D025254 ORTHO05D003195 1.1e-15 87.8 270 31.9
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.9e-15 87.0 201 34.8
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 7.4e-15 85.1 219 33.3
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 9.7e-15 84.7 210 34.8
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 9.7e-15 84.7 229 33.2
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.6e-14 84.0 226 31.0
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 2.8e-14 83.2 236 31.8
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 3.7e-14 82.8 206 35.9
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.8e-14 82.4 210 34.3
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 4.8e-14 82.4 251 32.7
arahy.Tifrunner.gnm1.ann1.SW5XY7 Arachis hypogaea HOM05D003792 ORTHO05D003195 8.2e-14 81.6 249 30.5
Gohir.A01G007200 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.1e-13 81.3 220 32.7
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.4e-13 80.1 215 32.6
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 5.3e-13 79.0 227 30.4
Gorai.002G008300 Gossypium raimondii HOM05D003792 ORTHO05D003195 6.9e-13 78.6 220 33.2
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 9.0e-13 78.2 226 31.9
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 1.2e-12 77.8 258 31.4
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 7.7e-12 75.1 215 31.2
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.0e-11 74.7 189 33.9
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 1.7e-11 73.9 249 30.9
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 1.7e-11 73.9 237 31.6
Lalb_Chr09g0328351 Lupinus albus HOM05D003792 ORTHO05D003195 1.7e-11 73.9 216 32.9
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 1.7e-11 73.9 165 34.5
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 3.8e-11 72.8 226 31.0
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 6.5e-11 72.0 158 39.2
Gohir.D01G007300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.5e-11 72.0 220 32.3
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 6.5e-11 72.0 169 37.9
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 8.5e-11 71.6 225 33.3
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 1.1e-10 71.2 194 34.0
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.4e-10 70.9 168 33.3
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 3.2e-10 69.7 225 29.3
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.2e-10 69.7 231 29.0
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 5.5e-10 68.9 218 30.7
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 7.2e-10 68.6 181 33.1
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 7.2e-10 68.6 222 32.4
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 9.4e-10 68.2 215 30.2
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 1.2e-09 67.8 247 30.4
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.2e-09 67.8 212 30.2
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 1.6e-09 67.4 217 33.2
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 2.7e-09 66.6 238 27.7
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 2.7e-09 66.6 196 31.1
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.6e-09 65.9 233 31.8
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 6.1e-09 65.5 234 30.8
AUR62042730 Chenopodium quinoa HOM05D043499 ORTHO05D003195 6.1e-09 65.5 212 31.6
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 6.1e-09 65.5 210 32.4
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 7.9e-09 65.1 182 32.4
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.0e-08 64.7 202 30.7
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 1.0e-08 64.7 191 29.3
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 1.0e-08 64.7 194 28.4
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 1.4e-08 64.3 217 30.0
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 1.4e-08 64.3 229 27.9
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 1.4e-08 64.3 179 34.6
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.3e-08 63.5 165 34.5
Psat7g125520 Pisum sativum HOM05D003792 ORTHO05D003195 3.0e-08 63.2 235 29.8
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 3.9e-08 62.8 245 29.8
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 3.9e-08 62.8 171 33.9
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 5.1e-08 62.4 229 30.6
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 6.7e-08 62.0 187 34.2
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 8.8e-08 61.6 191 28.8
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 8.8e-08 61.6 191 28.8
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 1.1e-07 61.2 219 26.9
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.1e-07 61.2 187 34.2
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.5e-07 60.8 206 32.5
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 1.5e-07 60.8 97 41.2
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 1.5e-07 60.8 189 31.7
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.0e-07 60.5 231 30.3
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 2.6e-07 60.1 191 29.8
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 2.6e-07 60.1 206 30.6
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 2.6e-07 60.1 232 28.0
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 3.3e-07 59.7 209 32.5
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 3.3e-07 59.7 186 30.6
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 5.7e-07 58.9 213 25.8
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 5.7e-07 58.9 170 32.4
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 9.7e-07 58.2 225 29.8
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 1.3e-06 57.8 194 29.4
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 1.7e-06 57.4 199 28.6
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 1.7e-06 57.4 190 27.9
CsaV3_7G008550 Cucumis sativus L. HOM05D003792 ORTHO05D003195 2.2e-06 57.0 217 27.6
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 2.2e-06 57.0 199 28.6
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 2.2e-06 57.0 185 31.9
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 2.2e-06 57.0 194 28.9
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 3.7e-06 56.2 196 30.6
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.7e-06 56.2 92 41.3
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.8e-06 55.8 190 31.1
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 4.8e-06 55.8 144 36.1
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 4.8e-06 55.8 200 29.5
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 6.3e-06 55.5 237 27.0
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 8.2e-06 55.1 206 29.6
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 8.2e-06 55.1 200 26.0
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 8.2e-06 55.1 200 26.5
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 8.2e-06 55.1 146 28.8


User provided reference genes

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