Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 0.0e+00 1618.2 841 100.0
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 0.0e+00 1351.3 843 84.1
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 2.8e-131 473.8 880 40.0
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 1.5e-124 451.4 890 38.3
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 2.2e-120 437.6 892 38.0
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 6.7e-101 372.9 877 36.0
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 4.0e-98 363.6 731 39.4
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 6.5e-96 356.3 879 35.6
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 9.3e-95 352.4 839 34.7
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 5.5e-87 326.6 528 41.7
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 2.8e-83 314.3 805 33.3
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 5.0e-80 303.5 833 33.5
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 2.0e-76 291.6 803 33.0
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 2.6e-76 291.2 803 32.5
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 6.3e-75 286.6 791 34.0
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 6.3e-75 286.6 801 33.1
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.3e-74 283.5 389 49.1
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 3.5e-73 280.8 843 31.6
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 4.5e-73 280.4 801 33.2
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 7.7e-73 279.6 867 31.5
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 1.1e-71 275.8 801 33.1
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 9.4e-71 272.7 877 31.1
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 9.4e-71 272.7 405 44.7
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 8.0e-70 269.6 404 43.8
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.8e-69 268.5 865 31.2
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 2.0e-68 265.0 864 31.0
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 4.4e-68 263.8 884 30.5
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 1.3e-67 262.3 295 53.6
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 1.8e-66 258.5 859 30.6
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 5.3e-66 256.9 839 30.0
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 5.0e-64 250.4 399 42.4
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.5e-63 248.8 874 30.5
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.9e-63 248.4 841 31.0
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 9.4e-63 246.1 288 52.4
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 1.6e-62 245.4 833 29.7
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.4e-61 242.3 816 32.2
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 1.8e-61 241.9 418 42.8
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 3.4e-60 237.7 273 50.5
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 4.4e-60 237.3 419 42.2
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 1.7e-59 235.3 422 40.8
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 1.1e-58 232.6 399 42.6
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.4e-58 232.3 212 59.4
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 2.4e-58 231.5 824 29.5
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 3.1e-58 231.1 829 31.2
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 5.9e-57 226.9 811 31.3
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 7.7e-57 226.5 400 43.2
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 7.7e-57 226.5 856 31.2
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 7.7e-57 226.5 220 57.3
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.0e-56 226.1 830 29.5
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.5e-55 222.2 887 27.7
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 3.6e-54 217.6 749 30.4
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 2.3e-53 214.9 237 51.1
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 4.4e-52 210.7 856 29.1
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 6.3e-51 206.8 383 39.4
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 1.1e-50 206.1 841 29.0
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 4.5e-49 200.7 845 29.1
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.8e-37 162.2 174 46.6
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 1.3e-35 156.0 176 47.2
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 1.2e-30 139.4 179 40.2
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.1e-26 126.3 214 36.9
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.4e-26 124.0 133 50.4
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.6e-25 122.5 249 34.9
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.1e-18 97.8 264 30.3
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.1e-18 97.8 264 30.3
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 6.2e-14 84.0 141 31.2
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 8.1e-14 83.6 665 25.7
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 8.4e-11 73.6 325 26.2
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 1.4e-10 72.8 142 33.8
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 2.4e-10 72.0 42 78.6
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 3.2e-10 71.6 135 30.4
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 4.2e-10 71.2 41 78.0
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 1.3e-08 66.2 43 72.1


User provided reference genes

Program Settings