Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1163.3 594 100.0
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 0.0e+00 1124.4 594 94.6
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1100.5 566 94.0
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1099.0 566 93.8
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 2.2e-300 1035.0 566 86.6
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 1.3e-295 1019.2 567 86.6
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 9.0e-294 1013.1 569 85.1
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 2.9e-292 1008.1 567 85.4
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.8e-292 1007.7 596 83.1
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 4.9e-292 1007.3 573 84.6
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 8.4e-292 1006.5 566 84.5
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 5.5e-291 1003.8 574 82.8
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 7.9e-290 1000.0 567 84.3
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 7.9e-290 1000.0 567 84.3
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.3e-289 998.4 567 84.3
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 5.1e-289 997.3 595 82.4
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 8.7e-289 996.5 598 83.6
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 8.7e-289 996.5 565 84.2
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 1.1e-288 996.1 567 85.7
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.1e-288 996.1 567 84.1
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 1.9e-288 995.3 566 84.3
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 1.6e-287 992.3 569 83.8
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.1e-287 991.9 565 83.7
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 3.7e-287 991.1 596 83.4
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 2.4e-286 988.4 572 83.4
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.5e-285 985.7 572 82.9
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.5e-285 985.7 573 81.8
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 3.4e-285 984.6 569 83.0
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.7e-284 982.2 567 84.0
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 2.1e-282 975.3 576 80.9
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.0e-281 973.0 566 82.5
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 1.3e-281 972.6 579 80.5
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 2.3e-281 971.8 571 82.8
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 6.7e-281 970.3 576 80.9
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 6.7e-281 970.3 568 81.9
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.1e-280 969.5 587 79.2
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 4.3e-280 967.6 566 81.3
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 1.6e-279 965.7 588 79.8
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.8e-279 964.9 593 78.9
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 2.8e-279 964.9 566 81.1
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.8e-279 964.1 593 78.8
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 4.8e-279 964.1 568 82.4
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 6.3e-279 963.8 600 79.3
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 6.3e-279 963.8 576 80.9
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 8.2e-279 963.4 593 78.8
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.4e-278 962.6 593 78.8
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 1.4e-278 962.6 561 82.2
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 1.4e-278 962.6 567 81.0
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 1.8e-278 962.2 571 81.8
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 2.4e-278 961.8 567 82.5
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 4.1e-278 961.1 567 80.8
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 1.2e-277 959.5 546 83.3
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 4.5e-277 957.6 599 77.8
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 5.8e-277 957.2 566 80.6
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 7.6e-277 956.8 600 79.0
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.0e-276 956.4 566 81.6
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 1.0e-276 956.4 574 78.9
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 2.2e-276 955.3 570 80.0
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 3.8e-276 954.5 586 81.6
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 5.0e-276 954.1 697 68.9
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 8.4e-276 953.4 570 80.0
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 4.2e-275 951.0 619 76.1
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 4.2e-275 951.0 565 80.4
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 5.5e-275 950.7 606 76.9
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 7.2e-275 950.3 573 78.7
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.5e-274 948.0 619 75.8
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 6.1e-274 947.2 597 77.2
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.8e-273 945.7 552 82.6
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.8e-273 945.7 565 81.2
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.5e-272 942.6 571 79.3
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 2.5e-272 941.8 572 79.9
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 3.3e-272 941.4 589 80.8
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 7.4e-272 940.3 574 79.6
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 9.7e-272 939.9 571 80.0
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 9.7e-272 939.9 574 79.1
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.3e-271 939.5 575 80.2
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 3.7e-271 937.9 573 79.4
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 3.7e-271 937.9 569 79.6
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 6.3e-271 937.2 601 76.7
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 6.3e-271 937.2 566 80.6
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 6.3e-271 937.2 570 78.4
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.8e-270 935.6 570 78.6
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 3.1e-270 934.9 572 79.4
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 4.1e-270 934.5 576 77.4
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 9.0e-270 933.3 572 79.2
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.2e-269 932.9 569 78.7
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 2.6e-269 931.8 567 79.9
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 5.9e-269 930.6 539 81.6
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 7.7e-269 930.2 581 76.8
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 2.2e-268 928.7 588 76.9
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 2.9e-268 928.3 575 78.4
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 3.8e-268 927.9 569 78.7
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 4.2e-267 924.5 567 77.8
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 4.2e-267 924.5 576 76.0
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 1.6e-266 922.5 583 75.3
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 7.9e-266 920.2 546 81.5
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 2.3e-265 918.7 604 76.3
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.9e-265 917.9 587 76.8
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 5.1e-265 917.5 568 78.3
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 5.1e-265 917.5 570 77.5
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 3.3e-264 914.8 570 77.0
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 9.7e-264 913.3 569 76.8
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 9.7e-264 913.3 570 77.2
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 1.7e-263 912.5 570 77.2
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 1.7e-263 912.5 519 84.8
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 2.8e-263 911.8 570 77.0
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 1.1e-262 909.8 570 76.7
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 1.8e-262 909.1 570 76.7
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 1.8e-262 909.1 568 76.4
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 1.8e-262 909.1 570 76.7
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 4.1e-262 907.9 568 76.9
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 5.3e-262 907.5 569 76.4
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.9e-262 907.1 568 76.6
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 6.9e-262 907.1 568 76.4
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 9.1e-262 906.7 569 76.4
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 2.0e-261 905.6 569 76.3
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.9e-259 899.0 569 78.0
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.1e-250 869.0 496 85.3
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 2.1e-250 869.0 574 74.9
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 2.7e-250 868.6 518 80.5
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 3.6e-250 868.2 573 74.5
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 4.4e-248 861.3 933 52.2
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 2.1e-242 842.4 549 73.2
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 2.7e-237 825.5 549 70.3
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.1e-234 815.8 863 52.0
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 2.8e-226 788.9 567 69.1
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.7e-220 769.6 594 68.5
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 4.9e-215 751.5 540 71.3
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 1.5e-211 740.0 559 64.8
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 9.8e-208 727.2 401 87.0
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 8.4e-199 697.6 422 76.3
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.0e-196 690.6 591 56.5
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 2.1e-181 639.8 340 91.8
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.7e-172 608.2 431 71.7
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 2.8e-162 576.2 420 71.2
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 2.6e-152 543.1 577 48.7
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.2e-150 535.8 307 86.0
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.7e-139 498.8 442 62.9
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 2.0e-115 420.6 349 57.3
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 6.8e-100 369.0 454 42.7
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.9e-97 360.9 476 42.4
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 9.2e-97 358.6 516 37.6
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 2.3e-95 354.0 212 76.4
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 3.4e-91 340.1 188 88.3
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 5.4e-89 332.8 202 76.2
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.9e-79 300.1 218 68.8
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 4.7e-77 293.1 224 62.9
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 4.7e-77 293.1 224 62.9
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 8.1e-77 292.4 619 32.6
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 2.1e-69 267.7 167 73.1
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 6.9e-68 262.7 169 71.6
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 4.9e-66 256.5 367 36.5
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 4.0e-52 210.3 228 52.6
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.4e-44 184.5 108 84.3
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 2.9e-34 151.0 117 60.7
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.0e-31 141.0 72 93.1
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 5.9e-27 126.7 138 47.8
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 1.0e-26 125.9 134 48.5
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 5.0e-18 97.1 105 52.4
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 4.0e-15 87.4 42 90.5
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 2.6e-14 84.7 49 73.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 2.6e-14 84.7 49 73.5
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 1.3e-13 82.4 48 70.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 7.0e-12 76.6 43 76.7
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 5.2e-07 60.5 46 58.7


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